BMRB Entry 6148

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6148

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Title:
Resonance Assignments and Secondary Structure of hPrxVI, a 25 kDa 1-Cys Human Peroxiredoxin Enzyme
Deposition date:
2004-03-17
Original release date:
2006-07-25
Authors:
Hong, Eunmi
Citation:

Citation: Hong, Eunmi; Shin, Joan; Kang, Sang; Tanaka, Toshiyuki; Lee, Weontae. "Letter to the Editor: Resonance Assignments and Secondary Structure of hPrxVI, a 25 kDa 1-Cys Human Peroxiredoxin Enzyme"  J. Biomol. NMR 31, 267-268 (2005).

Assembly members:

Assembly members:
Human Peroxidase, polymer, 224 residues, 25034.99 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Human Peroxidase: MPGGLLLGDVAPNFEANTTV GRIRFHDFLGDSWGILFSHP RDFTPVCTTELGRAAKLAPE FAKRNVKLIALSIDSVEDHL AWSKDINAYNCEEPTEKLPF PIIDDRNRELAILLGMLDPA EKDEKGMPVTARVVFVFGPD KKLKLSILYPATTGRNFDEI LRVVISLQLTAEKRVATPVD WKDGDSVMVLPTIPEEEAKK LFPKGVFTKELPSGKKYLRY TPQP

Data sets:
Data typeCount
1H chemical shifts1378
13C chemical shifts586
15N chemical shifts202

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Prxvi monomer1

Entities:

Entity 1, Prxvi monomer 224 residues - 25034.99 Da.

1   METPROGLYGLYLEULEULEUGLYASPVAL
2   ALAPROASNPHEGLUALAASNTHRTHRVAL
3   GLYARGILEARGPHEHISASPPHELEUGLY
4   ASPSERTRPGLYILELEUPHESERHISPRO
5   ARGASPPHETHRPROVALCYSTHRTHRGLU
6   LEUGLYARGALAALALYSLEUALAPROGLU
7   PHEALALYSARGASNVALLYSLEUILEALA
8   LEUSERILEASPSERVALGLUASPHISLEU
9   ALATRPSERLYSASPILEASNALATYRASN
10   CYSGLUGLUPROTHRGLULYSLEUPROPHE
11   PROILEILEASPASPARGASNARGGLULEU
12   ALAILELEULEUGLYMETLEUASPPROALA
13   GLULYSASPGLULYSGLYMETPROVALTHR
14   ALAARGVALVALPHEVALPHEGLYPROASP
15   LYSLYSLEULYSLEUSERILELEUTYRPRO
16   ALATHRTHRGLYARGASNPHEASPGLUILE
17   LEUARGVALVALILESERLEUGLNLEUTHR
18   ALAGLULYSARGVALALATHRPROVALASP
19   TRPLYSASPGLYASPSERVALMETVALLEU
20   PROTHRILEPROGLUGLUGLUALALYSLYS
21   LEUPHEPROLYSGLYVALPHETHRLYSGLU
22   LEUPROSERGLYLYSLYSTYRLEUARGTYR
23   THRPROGLNPRO

Samples:

sample_1: Human Peroxidase 1.5 mM

Ex-cond_1: pH: 7.4; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions
15N-HSQCsample_1not availableEx-cond_1
15N-NOESYsample_1not availableEx-cond_1
HNHAsample_1not availableEx-cond_1
HNCAsample_1not availableEx-cond_1
HNcoCAsample_1not availableEx-cond_1
HNCACBsample_1not availableEx-cond_1
HNcoCACBsample_1not availableEx-cond_1
HNCOsample_1not availableEx-cond_1
HNcaCOsample_1not availableEx-cond_1
CCCcoNH-TOCSYsample_1not availableEx-cond_1
HCCH-TOCSYsample_1not availableEx-cond_1
13C-NOESYsample_1not availableEx-cond_1

Software:

No software information available

NMR spectrometers:

  • Bruker DRX 800 MHz
  • Bruker DRX 600 MHz

Related Database Links:

PDB
DBJ BAA03496 BAE73101 BAF82041 BAG09605
EMBL CAH92320
GB AAH35857 AAH53550 ABB02185 ACJ13706 ADQ32658
REF NP_001126361 NP_001253014 NP_004896 XP_002760406 XP_003258941
SP P30041 Q2PFL9 Q5R7E0
AlphaFold P30041 Q2PFL9 Q5R7E0

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks