BMRB Entry 6081

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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6081
MolProbity Validation Chart

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Title:
1H, 13C and 15N chemical shift assignment of fly troponin C
Deposition date:
2004-01-20
Original release date:
2004-06-28
Authors:
De Nicola, Gian Felice; Biekofsky, Rolf; Agianian, Bogos; Bullard, Belinda
Citation:

Citation: De Nicola, Gian Felice; Biekofsky, Rolf; Kelly, Geoff; Agianian, Bogos; Qiu, Feng; Bullard, Belinda; Pastore, Annalisa. "Letter to the Editor: 1H, 15N and 13C Resonances of Holo Isoform 4 of Lethocerus Indicus Troponin C "  J. Biomol. NMR 29, 461-462 (2004).
PubMed: 15213469

Assembly members:

Assembly members:
Troponin C, polymer, 160 residues, 17577.22 Da.

Natural source:

Natural source:   Common Name: Lethocerus indicus   Taxonomy ID: 212017   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Lethocerus indicus

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Troponin C: GAMGDVSKLSSNQVKLLETA FRDFETPEGSGRVSTDQIGI ILEVLGIQQTKSTIRQLIDE FDPFGNGDIDFDSFKIIGAR FLGEEVNPEQMQQELREAFR LYDKEGNGYISTDVMREILA ELDETLSSEDLDAMIDEIDA DGSGTVDFEEFMGVMTGGDE

Data sets:
Data typeCount
1H chemical shifts903
13C chemical shifts590
15N chemical shifts171

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1TnC monomer1

Entities:

Entity 1, TnC monomer 160 residues - 17577.22 Da.

1   GLYALAMETGLYASPVALSERLYSLEUSER
2   SERASNGLNVALLYSLEULEUGLUTHRALA
3   PHEARGASPPHEGLUTHRPROGLUGLYSER
4   GLYARGVALSERTHRASPGLNILEGLYILE
5   ILELEUGLUVALLEUGLYILEGLNGLNTHR
6   LYSSERTHRILEARGGLNLEUILEASPGLU
7   PHEASPPROPHEGLYASNGLYASPILEASP
8   PHEASPSERPHELYSILEILEGLYALAARG
9   PHELEUGLYGLUGLUVALASNPROGLUGLN
10   METGLNGLNGLULEUARGGLUALAPHEARG
11   LEUTYRASPLYSGLUGLYASNGLYTYRILE
12   SERTHRASPVALMETARGGLUILELEUALA
13   GLULEUASPGLUTHRLEUSERSERGLUASP
14   LEUASPALAMETILEASPGLUILEASPALA
15   ASPGLYSERGLYTHRVALASPPHEGLUGLU
16   PHEMETGLYVALMETTHRGLYGLYASPGLU

Samples:

sample_1: Troponin C, [U-15N], 0.9 mM; KCl 100 mM; CaCl(2) 9 mM

sample_2: Troponin C, [U-13C; U-15N], 0.97 mM; KCl 100 mM; CaCl(2) 9 mM

experimental_conditions: pH: 6.8; temperature: 298 K; ionic strength: 0.125 M; pressure: 997 mbar

Experiments:

NameSampleSample stateSample conditions
15N HSQCnot availablenot availablenot available
15N NOESY-HSQCnot availablenot availablenot available
15N TOCSY-HSQCnot availablenot availablenot available
HNCOnot availablenot availablenot available
HNCAnot availablenot availablenot available
CBCANHnot availablenot availablenot available
CBCACONHnot availablenot availablenot available
CCONHnot availablenot availablenot available
HCCH-TOCSYnot availablenot availablenot available
HCCONHnot availablenot availablenot available
13C-HSQCnot availablenot availablenot available

Software:

XEASY - peak assignments

NMR PIPE - spectra processing

NMR spectrometers:

  • Varian INOVA 600 MHz
  • Varian INOVA 500 MHz
  • Varian UNITY 600 MHz

Related Database Links:

PDB
EMBL CAD55595

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks