BMRB Entry 6046

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PDB ID: 1s6n
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6046
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N resonance assignments for domain III of the West Nile Virus envelope protein

Deposition date:

2003-12-12

Original release date:

2004-07-06

Authors:

Volk, David; Kallick, Deborah; Holbrook, Michael; Beasley, David; Barrett, Alan; Gorenstein, David

Citation:

Citation: Volk, David; Kallick, Deborah; Holbrook, Michael; Beasley, David; Barrett, Alan; Gorenstein, David. "Letter to the Editor: 1H, 13C and 15N resonance assignments for domain III of the West Nile Virus envelope protein" J. Biomol. NMR 29, 445-446 (2004).
PubMed: 15213461

Assembly members:

Assembly members:
West Nile Virus envelope protein domain III, polymer, 115 residues, 12185 Da.

Natural source:

Natural source: Common Name: West Nile Virus I strain 385-99 Taxonomy ID: 11082 Superkingdom: Viruses Kingdom: not available Genus/species: Flavivirus West Nile Virus I

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
West Nile Virus envelope protein domain III: ISEFQLKGTTYGVCSKAFKF LGTPADTGHGTVVLELQYTG TDGPCKVPISSVASLNDLTP VGRLVTVNPFVSVATANAKV LIELEPPFGDSYIVVGRGEQ QINHHWHKSGSSIGK

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
13C chemical shifts	444
15N chemical shifts	110
1H chemical shifts	743

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	wnd3 subunit 1	1

Entities:

Entity 1, wnd3 subunit 1 115 residues - 12185 Da.

1

ILE

SER

GLU

PHE

GLN

LEU

LYS

GLY

THR

2

TYR

GLY

VAL

CYS

SER

LYS

ALA

PHE

LYS

PHE

3

LEU

GLY

THR

PRO

ALA

ASP

THR

GLY

HIS

GLY

4

THR

VAL

LEU

GLU

LEU

GLN

TYR

THR

GLY

5

THR

ASP

GLY

PRO

CYS

LYS

VAL

PRO

ILE

SER

6

SER

VAL

ALA

SER

LEU

ASN

ASP

LEU

THR

PRO

7

VAL

GLY

ARG

LEU

VAL

THR

VAL

ASN

PRO

PHE

8

VAL

SER

VAL

ALA

THR

ALA

ASN

ALA

LYS

VAL

9

LEU

ILE

GLU

LEU

GLU

PRO

PHE

GLY

ASP

10

SER

TYR

ILE

VAL

GLY

ARG

GLY

GLU

GLN

11

GLN

ILE

ASN

HIS

TRP

HIS

LYS

SER

GLY

12

SER

ILE

GLY

LYS

Samples:

sample_1: West Nile Virus envelope protein domain III, [U-95% 13C; U-95% 15N], 0.7 mM; K2HPO4 50 mM; NaCl 100 mM; NaN3 10 mM; EDTA 0.1 mM

Ex-cond_1: ionic strength: 0.26 M; pH: 6.8; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
HNCA	not available	not available	not available
HNCO	not available	not available	not available
HNCACB	not available	not available	not available
H(CC)CONH-TOCSY	not available	not available	not available
(H)CC(CO)NH-TOCSY	not available	not available	not available
HCCH-TOCSY	not available	not available	not available
15N-edited NOESY-HSQC	not available	not available	not available
13C-edited NOESY-HSQC	not available	not available	not available

Software:

No software information available

NMR spectrometers:

Varian UnityPlus 750 MHz