BMRB Entry 5993
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5993
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Citation: Thiviyanathan, Varatharasa; Somasunderam, Anoma; Volk, David; Gorenstein, David. "5-hydroxyuracil can form stable base pairs with all four bases in a DNA duplex" Chem. Commun. ., 400-402 (2005).
Assembly members:
DNA, polymer, 12 residues, 3647 Da.
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
DNA: CGCAAATTXGCG
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 114 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | DNA chain A | 1 |
| 2 | DNA chain B | 1 |
Entities:
Entity 1, DNA chain A 12 residues - 3647 Da.
| 1 | DC | DG | DC | DA | DA | DA | DT | DT | chem_comp_1 | DG | ||||
| 2 | DC | DG |
Samples:
sample_1: DNA 0.6 mM
cond_1: pH: 6.8; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOESY | sample_1 | not available | cond_1 |
| 2D TOCSY | sample_1 | not available | cond_1 |
| 31P HETCOR | sample_1 | not available | cond_1 |
| DQF-COSY | sample_1 | not available | cond_1 |
Software:
VNMR - NMR data processing
NMR spectrometers:
- Varian UnityPlus 750 MHz
- Varian UnityPlus 600 MHz