BMRB Entry 5982

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5982

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Complete 1H, 13C and 15N assignments of a monomeric, biologically active apolipoprotein E carboxyl-terminal domain

Deposition date:

2003-10-23

Original release date:

2004-07-06

Authors:

Fan, Daping; Korando, Leslie; Dothager, Robin; Li, Qianqian; Wang, Jianjun

Citation:

Citation: Fan, Daping; Korando, Leslie; Dothager, Robin; Li, Qianqian; Wang, Jianjun. "Letter to the Editor: Complete 1H, 13C and 15N assignments of a monomeric, biologically active apolipoprotein E carboxyl-terminal domain" J. Biomol. NMR 29, 419-420 (2004).
PubMed: 15213448

Assembly members:

Assembly members:
apolipoprotein E, polymer, 100 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
apolipoprotein E: GQPLQERAQAWGERLRARME EMGSRTRDRLDEVKEQVAEV RAKLEEQAQQIRLQAEAAQA RLKSRFEPLAEDMQRQWAGQ VEKVQAAEGTSAAPVPSDNH

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
13C chemical shifts	382
15N chemical shifts	95
1H chemical shifts	638

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	apoE C-terminal domain	1

Entities:

Entity 1, apoE C-terminal domain 100 residues - Formula weight is not available

1	GLY	GLN	PRO	LEU	GLN	GLU	ARG	ALA	GLN	ALA
2	TRP	GLY	GLU	ARG	LEU	ARG	ALA	ARG	MET	GLU
3	GLU	MET	GLY	SER	ARG	THR	ARG	ASP	ARG	LEU
4	ASP	GLU	VAL	LYS	GLU	GLN	VAL	ALA	GLU	VAL
5	ARG	ALA	LYS	LEU	GLU	GLU	GLN	ALA	GLN	GLN
6	ILE	ARG	LEU	GLN	ALA	GLU	ALA	ALA	GLN	ALA
7	ARG	LEU	LYS	SER	ARG	PHE	GLU	PRO	LEU	ALA
8	GLU	ASP	MET	GLN	ARG	GLN	TRP	ALA	GLY	GLN
9	VAL	GLU	LYS	VAL	GLN	ALA	ALA	GLU	GLY	THR
10	SER	ALA	ALA	PRO	VAL	PRO	SER	ASP	ASN	HIS

Samples:

sample_1: apolipoprotein E 1 mM; phosphate buffer 200 mM; NaN3 0.01%; TFE 30%

Ex-cond_1: ionic strength: 0.2 M; pH: 5.7; temperature: 283 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

NMR spectrometers:

VARIAN INOVA 500 MHz

BMRB	15744
PDB	2L7B

1	GLY	GLN	PRO	LEU	GLN	GLU	ARG	ALA	GLN	ALA
2	TRP	GLY	GLU	ARG	LEU	ARG	ALA	ARG	MET	GLU
3	GLU	MET	GLY	SER	ARG	THR	ARG	ASP	ARG	LEU
4	ASP	GLU	VAL	LYS	GLU	GLN	VAL	ALA	GLU	VAL
5	ARG	ALA	LYS	LEU	GLU	GLU	GLN	ALA	GLN	GLN
6	ILE	ARG	LEU	GLN	ALA	GLU	ALA	ALA	GLN	ALA
7	ARG	LEU	LYS	SER	ARG	PHE	GLU	PRO	LEU	ALA
8	GLU	ASP	MET	GLN	ARG	GLN	TRP	ALA	GLY	GLN
9	VAL	GLU	LYS	VAL	GLN	ALA	ALA	GLU	GLY	THR
10	SER	ALA	ALA	PRO	VAL	PRO	SER	ASP	ASN	HIS

1	GLY	GLN	PRO	LEU	GLN	GLU	ARG	ALA	GLN	ALA
2	TRP	GLY	GLU	ARG	LEU	ARG	ALA	ARG	MET	GLU
3	GLU	MET	GLY	SER	ARG	THR	ARG	ASP	ARG	LEU
4	ASP	GLU	VAL	LYS	GLU	GLN	VAL	ALA	GLU	VAL
5	ARG	ALA	LYS	LEU	GLU	GLU	GLN	ALA	GLN	GLN
6	ILE	ARG	LEU	GLN	ALA	GLU	ALA	ALA	GLN	ALA
7	ARG	LEU	LYS	SER	ARG	PHE	GLU	PRO	LEU	ALA
8	GLU	ASP	MET	GLN	ARG	GLN	TRP	ALA	GLY	GLN
9	VAL	GLU	LYS	VAL	GLN	ALA	ALA	GLU	GLY	THR
10	SER	ALA	ALA	PRO	VAL	PRO	SER	ASP	ASN	HIS