BMRB Entry 5943

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5943

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Letter to the Editor: 1H, 15N and 13C Resonance Assignments and Secondary Structure Determination of the D2 Domain of the Human Acidic Fibroblast Growth Factor Receptor

Deposition date:

2003-09-09

Original release date:

2004-09-30

Authors:

Hung, Kuo-Wei; Thallampuranam, SureshKumar; Yu, Chin

Citation:

Citation: Hung, Kuo-Wei; Kumar, T.; Yu, Chin. "Letter to the Editor: 1H, 13C and 15N chemical shift assignments of the D2 domain of the fibroblast growth factor." J. Biomol. NMR 30, 99-100 (2004).
PubMed: 15452438

Assembly members:

Assembly members:
Fibroblast growth factor receptor, polymer, 118 residues, 13709.59 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Fibroblast growth factor receptor: MNSNNKRAPYWTNTEKMEKR LHAVPAANTVKFRCPAGGNP MPTMRWLKNGKEFKQEHRIG GYKVRNQHWSLIMESVVPSD KGNYTCVVENEYGSINHTYH LDVVLVPRGSLEHHHHHH

Data sets:

assigned_chemical_shifts
- chemical_shift_set_1

Data type	Count
13C chemical shifts	336
15N chemical shifts	100
1H chemical shifts	720

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	FGFRD2 monomer	1

Entities:

Entity 1, FGFRD2 monomer 118 residues - 13709.59 Da.

1

MET

ASN

SER

ASN

LYS

ARG

ALA

PRO

TYR

2

TRP

THR

ASN

THR

GLU

LYS

MET

GLU

LYS

ARG

3

LEU

HIS

ALA

VAL

PRO

ALA

ASN

THR

VAL

4

LYS

PHE

ARG

CYS

PRO

ALA

GLY

ASN

PRO

5

MET

PRO

THR

MET

ARG

TRP

LEU

LYS

ASN

GLY

6

LYS

GLU

PHE

LYS

GLN

GLU

HIS

ARG

ILE

GLY

7

GLY

TYR

LYS

VAL

ARG

ASN

GLN

HIS

TRP

SER

8

LEU

ILE

MET

GLU

SER

VAL

PRO

SER

ASP

9

LYS

GLY

ASN

TYR

THR

CYS

VAL

GLU

ASN

10

GLU

TYR

GLY

SER

ILE

ASN

HIS

THR

TYR

HIS

11

LEU

ASP

VAL

LEU

VAL

PRO

ARG

GLY

SER

12

LEU

GLU

HIS

Samples:

sample_1: Fibroblast growth factor receptor, [U-13C; U-15U], 1.5 mM; phosphate 20 mM; NaCL 50 mM; Ammonium sulfate 50 mM; H2O 90%; D2O 10%

sample_cond_1: pH: 6.5; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
HNCA	not available	not available	not available
HN(CO)CA	not available	not available	not available
HNCO	not available	not available	not available
HN(CA)CO	not available	not available	not available
CBCA(CO)NH	not available	not available	not available
HNCACB	not available	not available	not available
15N-edited HSQC-NOESY	not available	not available	not available
13C-edited HSQC-NOESY	not available	not available	not available
TOCSY-HSQC	not available	not available	not available
HCCH-TOCSY	not available	not available	not available

Software:

No software information available

NMR spectrometers:

Bruker AVANCE 600 MHz

PDB	1E0O 1EV2 1II4 1IIL 1WVZ 2FDB 3CAF 3CU1 3DAR 3EUU 3OJ2 3OJM 4J23
DBJ	BAA89296 BAA89297 BAA89298 BAA89299 BAA89300
EMBL	CAA37014 CAA39654 CAA96492
GB	AAA02691 AAA02693 AAA36147 AAA36152 AAA39377
PIR	A54846
REF	NP_000132 NP_001003336 NP_001076157 NP_001103365 NP_001103366
SP	P21802
TPG	DAA14698
AlphaFold	P21802