BMRB Entry 5883

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5883

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

How C-Terminal Carboxyamidation Alters the Biological Activity of Peptides from the Venom of the Eumenine Solitary WasP

Deposition date:

2003-07-28

Original release date:

2008-07-16

Authors:

Sforca, Mauricio; Oyama, Sergio; Canduri, Fernanda; Lorenzi, Carla; Pertinhez, Thelma; Konno, Katsuhiro; Souza, Bibiana; Palma, Mario; Nero, Joao; Azevedo, Walter; Spisni, Alberto

Citation:

Citation: Sforca, Mauricio; Oyama Jr., Sergio; Canduri, Fernanda; Lorenzi, Carla; Pertinhez, Thelma; Konno, Katsuhiro; Souza, Bibiana; Palma, Mario; Nero, Joao; Azevedo Jr., Walter; Spisni, Alberto. "How C-Terminal Carboxyamidation Alters the Biological Activity of Peptides from the Venom of the Eumenine Solitary WasP" Biochemistry 43, 5608-5617 (2004).
PubMed: 15134435

Assembly members:

Assembly members:
eumenine mastoparan Antherichium flavourmarginatum micado, polymer, 14 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Solitary wasp Taxonomy ID: 329991 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Anterhynchium flavormarginatum micado flavomarginatum

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
eumenine mastoparan Antherichium flavourmarginatum micado: INLLKIAKGIIKSX

Data sets:

assigned_chemical_shifts
- empaf_cs

Data type	Count
1H chemical shifts	85
coupling constants	10

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	empaf, eumenine mastoparan	1

Entities:

Entity 1, empaf, eumenine mastoparan 14 residues - Formula weight is not available

1

ILE

ASN

LEU

LYS

ILE

ALA

LYS

GLY

ILE

2

ILE

LYS

SER

NLW

Samples:

empaf_contents: eumenine mastoparan Antherichium flavourmarginatum micado 1.0 mM; 2,2,2-Trifluorethanol 30%

empaf_cond: pH: 4.5; temperature: 293 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H NOESY	empaf_contents	not available	empaf_cond
2D 1H TOCSY	empaf_contents	not available	empaf_cond
2D 1H COSY	empaf_contents	not available	empaf_cond
2D 1H DQF-COSY	empaf_contents	not available	empaf_cond

Software:

NMRpipe v5.0 - semi automated peak assignments

DISCOVER v2000 - energy minimization

DYANA v1.5 - annealing

ProcheckNMR v3.5.4 - analysis of NMR restraints violations

CNS v1.1 - analysis of NMR restraints violations

NMRview v5.0 - semi automated peak assignments

NMR spectrometers:

Varian INOVA 500 MHz