BMRB Entry 5874

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PDB ID: 1jru
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5874
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Complete backbone resonance assignments of p47: the 41kDa adaptor protein of the AAA ATPase p97

Deposition date:

2003-07-18

Original release date:

2003-12-05

Authors:

Yuan, Xuemei; Simpson, Pete; Kondo, Hisao; Mckeown, Ciaran; Dreveny, Ingrid; Shaw, Anthony; Zhang, Xiaodong; Freemont, Paul; Matthews, Stephen

Citation:

Citation: Yuan, Xuemei; Simpson, Pete; Kondo, Hisao; Mckeown, Ciaran; Dreveny, Ingrid; Shaw, Anthony; Zhang, Xiaodong; Freemont, Paul; Matthews, Stephen. "Complete backbone resonance assignments of p47: the 41kDa adaptor protein of the AAA ATPase p97" J. Biomol. NMR 28, 309-310 (2004).
PubMed: 14752269

Assembly members:

Assembly members:
p47, polymer, 174 residues, 41000 Da.

Natural source:

Natural source: Common Name: Norway rat Taxonomy ID: 10116 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Rattus norvegicus

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
p47: MAEERQDALREFVAVTGAEE DRARFFLESAGWDLQIALAS FYEDGGDEDIVTISQATPSS VSRGTAPSDNRVTSFRDLIH DQDEEEEEEEGQRFYAGGSE RSGQQIVGPPRKKSPNELVD DLFKGAKEHGAVAVERVTKS PGETSKPRPFAGGGYRLGAA PEEESAYVAGERRR

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
13C chemical shifts	282
15N chemical shifts	140
1H chemical shifts	759

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	p47 residues 1-174, p47 monomer	1

Entities:

Entity 1, p47 residues 1-174, p47 monomer 174 residues - 41000 Da.

1

MET

ALA

GLU

ARG

GLN

ASP

ALA

LEU

ARG

2

GLU

PHE

VAL

ALA

VAL

THR

GLY

ALA

GLU

3

ASP

ARG

ALA

ARG

PHE

LEU

GLU

SER

ALA

4

GLY

TRP

ASP

LEU

GLN

ILE

ALA

LEU

ALA

SER

5

PHE

TYR

GLU

ASP

GLY

ASP

GLU

ASP

ILE

6

VAL

THR

ILE

SER

GLN

ALA

THR

PRO

SER

7

VAL

SER

ARG

GLY

THR

ALA

PRO

SER

ASP

ASN

8

ARG

VAL

THR

SER

PHE

ARG

ASP

LEU

ILE

HIS

9

ASP

GLN

ASP

GLU

10

GLY

GLN

ARG

PHE

TYR

ALA

GLY

SER

GLU

11

ARG

SER

GLY

GLN

ILE

VAL

GLY

PRO

12

ARG

LYS

SER

PRO

ASN

GLU

LEU

VAL

ASP

13

ASP

LEU

PHE

LYS

GLY

ALA

LYS

GLU

HIS

GLY

14

ALA

VAL

ALA

VAL

GLU

ARG

VAL

THR

LYS

SER

15

PRO

GLY

GLU

THR

SER

LYS

PRO

ARG

PRO

PHE

16

ALA

GLY

TYR

ARG

LEU

GLY

ALA

17

PRO

GLU

SER

ALA

TYR

VAL

ALA

GLY

18

GLU

ARG

Samples:

sample_1: p47, [U-13C; U-15N], 0.5 mM

ex-cond: pH: 5.3; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
HNCA	not available	not available	not available
HN(CO)CA	not available	not available	not available
HNCO	not available	not available	not available
CBCA(CO)NH	not available	not available	not available
HNCACB	not available	not available	not available
HBHA(CBCACO)NH	not available	not available	not available
1H-15N NOESY	not available	not available	not available
1H-13C NOESY	not available	not available	not available

Software:

NMRPipe -

NMRView -

NMR spectrometers:

Bruker DRX 500 MHz
Varian . 800 MHz

DBJ	BAA21659 BAA91731 BAB28604 BAC30250 BAD97061
EMBL	CAA71742 CAH90897
GB	AAD44488 AAH02801 AAH50936 AAH72464 AAI02957
REF	NP_001029729 NP_001125510 NP_001231372 NP_001278003 NP_057227
SP	O35987 Q3SZC4 Q5RBG3 Q9CZ44 Q9UNZ2
TPG	DAA23261
AlphaFold	O35987 Q3SZC4 Q5RBG3 Q9CZ44 Q9UNZ2 O35987 Q3SZC4 Q5RBG3 Q9CZ44 Q9UNZ2