BMRB Entry 5862
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5862
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NMR-STAR v3 text file.
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Citation: Tsao, Desiree; Hum, Wah-Tung; Hsu, Sang; Mcguire, Michelle; Malakian, Karl; Lin, Lih-Ling. "Letter to the Editor: Assignment of 1H, 13C and 15N resonances of the death
doamin of TRADD" J. Biomol. NMR 28, 407-408 (2004).
PubMed: 14872135
Assembly members:
TRADD death domain, polymer, 124 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
TRADD death domain: MPPPAQTFLFQGQPVVNRPL
SLKDQQTFARSVGLKWRKVG
RSLQRGCRALRDPALDSLAY
EYEREGLYEQAFQLLRRFVQ
AEGRRATLQRLVEALEENEL
TSLAEDLLGLTDPNGGLAHH
HHHH
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 714 |
| 13C chemical shifts | 381 |
| 15N chemical shifts | 122 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | death domain of TRADD-DD | 1 |
Entities:
Entity 1, death domain of TRADD-DD 124 residues - Formula weight is not available
| 1 | MET | PRO | PRO | PRO | ALA | GLN | THR | PHE | LEU | PHE | ||||
| 2 | GLN | GLY | GLN | PRO | VAL | VAL | ASN | ARG | PRO | LEU | ||||
| 3 | SER | LEU | LYS | ASP | GLN | GLN | THR | PHE | ALA | ARG | ||||
| 4 | SER | VAL | GLY | LEU | LYS | TRP | ARG | LYS | VAL | GLY | ||||
| 5 | ARG | SER | LEU | GLN | ARG | GLY | CYS | ARG | ALA | LEU | ||||
| 6 | ARG | ASP | PRO | ALA | LEU | ASP | SER | LEU | ALA | TYR | ||||
| 7 | GLU | TYR | GLU | ARG | GLU | GLY | LEU | TYR | GLU | GLN | ||||
| 8 | ALA | PHE | GLN | LEU | LEU | ARG | ARG | PHE | VAL | GLN | ||||
| 9 | ALA | GLU | GLY | ARG | ARG | ALA | THR | LEU | GLN | ARG | ||||
| 10 | LEU | VAL | GLU | ALA | LEU | GLU | GLU | ASN | GLU | LEU | ||||
| 11 | THR | SER | LEU | ALA | GLU | ASP | LEU | LEU | GLY | LEU | ||||
| 12 | THR | ASP | PRO | ASN | GLY | GLY | LEU | ALA | HIS | HIS | ||||
| 13 | HIS | HIS | HIS | HIS |
Samples:
sample_1: TRADD death domain, [U-15N], 0.6 – 1.1 mM
sample_2: TRADD death domain, [U-15N; U-13C], 0.6 – 1.1 mM; Sodium Acetate 10 mM
Condition_1: pH: 4.2; temperature: 303 K; ionic strength: 0.010 M
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 1H-15N HSQC | not available | not available | not available |
| 1H-13C HSQC | not available | not available | not available |
| HNCACB | not available | not available | not available |
| CBCACONH | not available | not available | not available |
| 1H-15N NOESY-HSQC | not available | not available | not available |
| CC(CO)NH-TOCSY | not available | not available | not available |
| HCC(CO)NH-TOCSY | not available | not available | not available |
Software:
No software information available
NMR spectrometers:
- BRUKER Avance 600 MHz
Related Database Links:
| DBJ | BAG38020 BAG52211 BAJ20315 |
| EMBL | CAC38018 |
| GB | AAA98482 AAH04491 AAP35580 AAP36466 AAS68637 |
| REF | NP_003780 XP_002802576 XP_003262922 XP_003812258 XP_003917062 |
| SP | Q15628 |
| AlphaFold | Q15628 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks