BMRB Entry 5782

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5782

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H chemical shift assignment for the truncated form of the human beta2-microglobulin lacking of the first 3 residues

Deposition date:

2003-04-24

Original release date:

2004-02-12

Authors:

Viglino, Paolo; Corazza, Alessandra; Pettirossi, Fabio; Verdone, Giuliana; Esposito, Gennaro

Citation:

Citation: Corazza, Alessandra; Pettirossi, Fabio; Viglino, Paolo; Verdone, Giuliana; Garcia, Julian; Dumy, Pascal; Giorgetti, Sofia; Mangione, Palma; Andreola, Alessia; Stoppini, Monica; Bellotti, Vittorio; Esposito, Gennaro. "Properties of some variants of human beta2-microglobulin and amyloidogenesis" J. Biol. Chem. ., .-..
PubMed: 14660575

Assembly members:

Assembly members:
beta2-microglobulin, polymer, 97 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
beta2-microglobulin: MTPKIQVYSRHPAENGKSNF LNCYVSGFHPSDIEVDLLKN GERIEKVEHSDLSFSKDWSF YLLYYTEFTPTEKDEYACRV NHVTLSQPKIVKWDRDM

Data sets:

assigned_chemical_shifts
- shift_set_1
- shift_set_2

Data type	Count
1H chemical shifts	716

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	DN3beta2-microglobulin	1

Entities:

Entity 1, DN3beta2-microglobulin 97 residues - Formula weight is not available

1

MET

THR

PRO

LYS

ILE

GLN

VAL

TYR

SER

ARG

2

HIS

PRO

ALA

GLU

ASN

GLY

LYS

SER

ASN

PHE

3

LEU

ASN

CYS

TYR

VAL

SER

GLY

PHE

HIS

PRO

4

SER

ASP

ILE

GLU

VAL

ASP

LEU

LYS

ASN

5

GLY

GLU

ARG

ILE

GLU

LYS

VAL

GLU

HIS

SER

6

ASP

LEU

SER

PHE

SER

LYS

ASP

TRP

SER

PHE

7

TYR

LEU

TYR

THR

GLU

PHE

THR

PRO

8

THR

GLU

LYS

ASP

GLU

TYR

ALA

CYS

ARG

VAL

9

ASN

HIS

VAL

THR

LEU

SER

GLN

PRO

LYS

ILE

10

VAL

LYS

TRP

ASP

ARG

ASP

MET

Samples:

sample_1: beta2-microglobulin 0.86 mM; sodium phosphate 70 mM; sodium chloride 100 mM; H2O 100%

sample_2: beta2-microglobulin 0.7 mM; sodium phosphate 70 mM; sodium chloride 100 mM; D2O 95%; H2O 5%

Ex-cond_1: pH: 6.5 na; temperature: 310 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H-1H TOCSY	not available	not available	not available
1H-1H NOESY	not available	not available	not available
1H-1H DQF-COSY	not available	not available	not available

Software:

FELIX v2000 -

NMR spectrometers:

Bruker Avance 500 MHz