BMRB Entry 5752

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5752

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Title:
1H, 13C and 15N backbone resonance assignment of the Integrin alpha2 I-domain
Deposition date:
2003-03-21
Original release date:
2003-08-07
Authors:
Elshorst, Bettina; Jacobs, Doris; Schwalbe, Harald; Langer, Thomas
Citation:

Citation: Elshorst, Bettina; Jacobs, Doris; Schwalbe, Harald; Langer, Thomas. "Letter to the Editor: 1H, 13C and 15N backbone resonance assignment of the Integrin alpha2 I-domain"  J. Biomol. NMR 27, 191-192 (2003).

Assembly members:

Assembly members:
human Integrin alpha2 I-domain, polymer, 200 residues, Formula weight is not available
MG, non-polymer, 24.305 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
human Integrin alpha2 I-domain: GAMGSLIDVVVVCDESNSIY PWDAVKNFLEKFVQGLDIGP TKTQVGLIQYANNPRVVFNL NTYKTKEEMIVATSQTSQYG GDLTNTFGAIQYARKYAYSA ASGGRRSATKVMVVVTDGES HDGSMLKAVIDQCNHDNILR FGIAVLGYLNRNALDTKNLI KEIKAIASIPTERYFFNVSD EAALLEKAGTLGEQIFSIEG

Data sets:
Data typeCount
1H chemical shifts194
13C chemical shifts580
15N chemical shifts194

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1human Integrin alpha2 I-domain1
2magnesium ion II2

Entities:

Entity 1, human Integrin alpha2 I-domain 200 residues - Formula weight is not available

1   GLYALAMETGLYSERLEUILEASPVALVAL
2   VALVALCYSASPGLUSERASNSERILETYR
3   PROTRPASPALAVALLYSASNPHELEUGLU
4   LYSPHEVALGLNGLYLEUASPILEGLYPRO
5   THRLYSTHRGLNVALGLYLEUILEGLNTYR
6   ALAASNASNPROARGVALVALPHEASNLEU
7   ASNTHRTYRLYSTHRLYSGLUGLUMETILE
8   VALALATHRSERGLNTHRSERGLNTYRGLY
9   GLYASPLEUTHRASNTHRPHEGLYALAILE
10   GLNTYRALAARGLYSTYRALATYRSERALA
11   ALASERGLYGLYARGARGSERALATHRLYS
12   VALMETVALVALVALTHRASPGLYGLUSER
13   HISASPGLYSERMETLEULYSALAVALILE
14   ASPGLNCYSASNHISASPASNILELEUARG
15   PHEGLYILEALAVALLEUGLYTYRLEUASN
16   ARGASNALALEUASPTHRLYSASNLEUILE
17   LYSGLUILELYSALAILEALASERILEPRO
18   THRGLUARGTYRPHEPHEASNVALSERASP
19   GLUALAALALEULEUGLULYSALAGLYTHR
20   LEUGLYGLUGLNILEPHESERILEGLUGLY

Entity 2, magnesium ion II - Mg - 24.305 Da.

1   MG

Samples:

int-sample_1: human Integrin alpha2 I-domain, [U-2H; U-13C; U-15N], 1 mM

ex_cond_1: pH: 6.5; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
TROSY-Version of 1H, 15N-HSQCint-sample_1not availableex_cond_1
HNCACBint-sample_1not availableex_cond_1
CBCA(CO)NHint-sample_1not availableex_cond_1
HNCOint-sample_1not availableex_cond_1
HN(CA)COint-sample_1not availableex_cond_1

Software:

XWINNMR v3.1 - NMR data processing

XEASY - NMR data analysis, visualization

NMR spectrometers:

  • Bruker DRX 800 MHz

Related Database Links:

PDB
DBJ BAG11081
EMBL CAA34894
GB AAC94975 AAI48597 AAI56716 AAM34795 EAW54872
REF NP_001247751 NP_002194 XP_003276566 XP_003827399 XP_003899707
SP P17301
AlphaFold P17301

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks