BMRB Entry 5717

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PDB ID: 1k8j
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5717
MolProbity Validation Chart

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Title:
NMR STRUCTURE OF THE CK14 DNA DUPLEX: A PORTION OF THE KNOWN NF-kB SEQUENCE CK1
Deposition date:
2003-03-04
Original release date:
2003-04-30
Authors:
Volk, D.; Yang, X.; Fennewald, S.; King, D.; Bassett, Suzanne; Venkitachalam, S.; Herzog, N.; Luxon, B.; Gorenstein, D.
Citation:

Citation: Volk, David; Yang, Xianbin; Fennewald, Susan; King, David; Bassett, Suzanne; Venkitachalam, Sheela; Herzog, Norbert; Luxon, Bruce; Gorenstein, David. "Solution Structure and Design of Dithiophosphate Backbone Aptamers Targeting Transcription Factor NF-kB"  Bioorg. Chem. 30, 396-419 (2002).

Assembly members:

Assembly members:
XBY6A, polymer, 14 residues, Formula weight is not available
XBY6B, polymer, 14 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: E. Coli   Taxonomy ID: 562   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Escherichia coli

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
XBY6A: CCAGGAGATTCCAC
XBY6B: GTGGAATCTCCTGG

Data sets:
Data typeCount
1H chemical shifts100

Additional metadata:

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  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1XBY6A1
2XBY6B2

Entities:

Entity 1, XBY6A 14 residues - Formula weight is not available

1   DCDCDADGDGDADGDADTDT
2   DCDCDADC

Entity 2, XBY6B 14 residues - Formula weight is not available

1   DGDTDGDGDADADTDCDTDC
2   DCDTDGDG