BMRB Entry 5695

Click here to enlarge.

PDB ID: 1nyn
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5695
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Solution Structure of the Product of the S. Cerevisiae YHR087W Gene, Northeast Structural Genomics Consortium target YTYst425

Deposition date:

2003-02-14

Original release date:

2003-04-30

Authors:

Cort, John; Yee, Adelinda; Arrowsmith, Cheryl; Kennedy, Michael

Citation:

Citation: Cort, John; Yee, Adelinda; Arrowsmith, Cheryl; Kennedy, Michael. "Solution Structure of the Product of the S. Cerevisiae YHR087W Gene" The BMRB entry is the only known published source for the data..

Assembly members:

Assembly members:
YHR087W, polymer, 131 residues, 12000 Da.

Natural source:

Natural source: Common Name: Yeast Taxonomy ID: 4932 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
YHR087W: MGSSHHHHHHSSGLVPRGSH MSTVTKYFYKGENTDLIVFA ASEELVDEYLKNPSIGKLSE VVELFEVFTPQDGRGAEGEL GAASKAQVENEFGKGKKIEE VIDLILRNGKPNSTTSSLKT KGGNAGTKAYN

Data sets:

assigned_chemical_shifts
- shift_set_1
coupling_constants
- coupling_constant_set_1

Data type	Count
1H chemical shifts	547
13C chemical shifts	355
15N chemical shifts	78
coupling constants	60

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	YHRO87W	1

Entities:

Entity 1, YHRO87W 131 residues - 12000 Da.

1

MET

GLY

SER

HIS

2

SER

GLY

LEU

VAL

PRO

ARG

GLY

SER

HIS

3

MET

SER

THR

VAL

THR

LYS

TYR

PHE

TYR

LYS

4

GLY

GLU

ASN

THR

ASP

LEU

ILE

VAL

PHE

ALA

5

ALA

SER

GLU

LEU

VAL

ASP

GLU

TYR

LEU

6

LYS

ASN

PRO

SER

ILE

GLY

LYS

LEU

SER

GLU

7

VAL

GLU

LEU

PHE

GLU

VAL

PHE

THR

PRO

8

GLN

ASP

GLY

ARG

GLY

ALA

GLU

GLY

GLU

LEU

9

GLY

ALA

SER

LYS

ALA

GLN

VAL

GLU

ASN

10

GLU

PHE

GLY

LYS

GLY

LYS

ILE

GLU

11

VAL

ILE

ASP

LEU

ILE

LEU

ARG

ASN

GLY

LYS

12

PRO

ASN

SER

THR

SER

LEU

LYS

THR

13

LYS

GLY

ASN

ALA

GLY

THR

LYS

ALA

TYR

14

ASN

Samples:

sample_1: YHR087W, [U-13C; U-15N], 1 mM; sodium acetate 10 mM; sodium chloride 300 mM

sample_2: YHR087W, [U-10% 13C; 99%-15N], 1 mM; sodium acetate 10 mM; sodium chloride 300 mM

Ex-cond_1: pH: 5.0; temperature: 298 K; ionic strength: 0.31 M

Experiments:

Name	Sample	Sample state	Sample conditions
HNCACB	not available	not available	Ex-cond_1
CBCA(CO)NH	not available	not available	Ex-cond_1
HNCO	not available	not available	Ex-cond_1
HCCH-TOCSY	not available	not available	Ex-cond_1
HCC-TOCSY-NNH	not available	not available	Ex-cond_1
CCC-TOCSY-NNH	not available	not available	Ex-cond_1
CBCACOCAHA	not available	not available	Ex-cond_1

Software:

No software information available

NMR spectrometers:

Varian Inova 750 MHz
Varian Inova 600 MHz
Varian Unity 600 MHz

PDB	1NYN
DBJ	GAA23805
EMBL	CAY80098
GB	AAB68927 AAS56171 AHY77788 EDN62328 EDV09136
REF	NP_011955
SP	P38804
TPG	DAA06783
AlphaFold	P38804