BMRB Entry 5686

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5686

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H, 13C and 15N resonance assignments of the 50kD response regulator HP1043 from Helicobactor pylori

Deposition date:

2003-02-04

Original release date:

2005-08-16

Authors:

Hong, Eunmi

Citation:

Citation: Hong, Eunmi; Jung, Jin-Won; Shin, Joon; Kim, Jin-Hwan; Jeon, Young-Ho; Yamazaki, Toshio; Lee, Weontae. "Letter to the Editor: Backbone 1H, 13C and 15N resonance assignments of the response regulator HP1043 from Helicobactor pylori" J. Biomol. NMR 28, 85-86 (2004).
PubMed: 14739642

Assembly members:

Assembly members:
Helicobactor pylori 1043, polymer, 223 residues, 25468.2 Da.

Natural source:

Natural source: Common Name: Helicobactor pylori Taxonomy ID: 85962 Superkingdom: Eubacteria Kingdom: not available Genus/species: Helicobactor pylori

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Helicobactor pylori 1043: MRVLLIEKNSVLGGEIEKGL NVKGFMADVTESLEDGEYLM DIRNYDLVMVSDKNALSFVS RIKEKHSSIVVLVSSDNPTS EEEVHAFEQGADDYIAKPYR SIKALVARIEARLRFWGSNV IEIGDLTISPDEEKIIYKGR EVEVKGKPFEVLTHLARHRD QIVSKEQLLDAIWEEPEMVT PNVIEVAINQIRQKMDKPLG ISTVETVRRRGYRFCYPKPA CEE

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	1522
13C chemical shifts	872
15N chemical shifts	208

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	HP1043 subunit 1	1
2	HP1043 subunit 2	1

Entities:

Entity 1, HP1043 subunit 1 223 residues - 25468.2 Da.

1

MET

ARG

VAL

LEU

ILE

GLU

LYS

ASN

SER

2

VAL

LEU

GLY

GLU

ILE

GLU

LYS

GLY

LEU

3

ASN

VAL

LYS

GLY

PHE

MET

ALA

ASP

VAL

THR

4

GLU

SER

LEU

GLU

ASP

GLY

GLU

TYR

LEU

MET

5

ASP

ILE

ARG

ASN

TYR

ASP

LEU

VAL

MET

VAL

6

SER

ASP

LYS

ASN

ALA

LEU

SER

PHE

VAL

SER

7

ARG

ILE

LYS

GLU

LYS

HIS

SER

ILE

VAL

8

VAL

LEU

VAL

SER

ASP

ASN

PRO

THR

SER

9

GLU

VAL

HIS

ALA

PHE

GLU

GLN

GLY

10

ALA

ASP

TYR

ILE

ALA

LYS

PRO

TYR

ARG

11

SER

ILE

LYS

ALA

LEU

VAL

ALA

ARG

ILE

GLU

12

ALA

ARG

LEU

ARG

PHE

TRP

GLY

SER

ASN

VAL

13

ILE

GLU

ILE

GLY

ASP

LEU

THR

ILE

SER

PRO

14

ASP

GLU

LYS

ILE

TYR

LYS

GLY

ARG

15

GLU

VAL

GLU

VAL

LYS

GLY

LYS

PRO

PHE

GLU

16

VAL

LEU

THR

HIS

LEU

ALA

ARG

HIS

ARG

ASP

17

GLN

ILE

VAL

SER

LYS

GLU

GLN

LEU

ASP

18

ALA

ILE

TRP

GLU

PRO

GLU

MET

VAL

THR

19

PRO

ASN

VAL

ILE

GLU

VAL

ALA

ILE

ASN

GLN

20

ILE

ARG

GLN

LYS

MET

ASP

LYS

PRO

LEU

GLY

21

ILE

SER

THR

VAL

GLU

THR

VAL

ARG

22

GLY

TYR

ARG

PHE

CYS

TYR

PRO

LYS

PRO

ALA

23

CYS

GLU

Samples:

sample_1: Helicobactor pylori 1043 0.8 mM

Ex-cond_1: pH: 7.23; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H-15N HSQC	not available	not available	not available
HNCA	not available	not available	not available
HN(CO)CA	not available	not available	not available
HNCACB	not available	not available	not available
HN(CO)CACB	not available	not available	not available
HNCO	not available	not available	not available
1H-15N NOESY-HSQC	not available	not available	not available
HCCH-TOCSY	not available	not available	not available
HCCH-COSY	not available	not available	not available
13C-edited NOESY	not available	not available	not available

Software:

No software information available

NMR spectrometers:

Bruker DRX 500 MHz
Bruker DRX 600 MHz
Bruker DRX 800 MHz

PDB	2HQO 2HQR 2PLN
DBJ	BAJ55005 BAJ56990 BAJ58486 BAJ59530 BAM96319
EMBL	CAX28949 CBI66718
GB	AAD05966 AAD08088 ABF84471 ACD47870 ACI27150
REF	NP_207833 NP_223100 WP_001221517 WP_001221518 WP_001221519