BMRB Entry 5568

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5568

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Title:
A new member of the split bab fold: Solution structure of the protein encoded by the YML108W open reading frame from Saccharomyces cerevisiae
Deposition date:
2002-10-31
Original release date:
2003-07-07
Authors:
Pineda-Lucena, Antonio
Citation:

Citation: Pineda-Lucena, Antonio; Liao, Jack; Cort, John; Yee, Adelinda; Kennedy, Michael; Edwards, Aled; Arrowsmith, Cheryl. "A Novel Member of the Split Betaaalphabeta Fold: Solution Structure of the Hypothetical Protein YML108W from Saccharomyces cerevisiae"  Protein Sci. 12, 1136-1140 (2003).
PubMed: 12717036

Assembly members:

Assembly members:
YML108W, polymer, 105 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: baker's yeast   Taxonomy ID: 4932   Superkingdom: Eukaryota   Kingdom: Fungi   Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
YML108W: MSKSNTYRMLVLLEDDTKIN KEDEKFLKGKPGKMHEFVDE LILPFNVDELDELNTWFDKF DAEICIPNEGHIKYEISSDG LIVLMLDKEIEEVVEKVKKF VEENN

Data sets:
Data typeCount
1H chemical shifts701
13C chemical shifts425
15N chemical shifts92

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1YML108W1

Entities:

Entity 1, YML108W 105 residues - Formula weight is not available

1   METSERLYSSERASNTHRTYRARGMETLEU
2   VALLEULEUGLUASPASPTHRLYSILEASN
3   LYSGLUASPGLULYSPHELEULYSGLYLYS
4   PROGLYLYSMETHISGLUPHEVALASPGLU
5   LEUILELEUPROPHEASNVALASPGLULEU
6   ASPGLULEUASNTHRTRPPHEASPLYSPHE
7   ASPALAGLUILECYSILEPROASNGLUGLY
8   HISILELYSTYRGLUILESERSERASPGLY
9   LEUILEVALLEUMETLEUASPLYSGLUILE
10   GLUGLUVALVALGLULYSVALLYSLYSPHE
11   VALGLUGLUASNASN

Samples:

SAMPLE_1: YML108W, [U-13C; U-15N], 1.0 – 1.5 mM

EXPERIMENTAL_CONDITIONS_1: pH: 6.5; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
15N-HSQCSAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
13C-HSQCSAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
HNCOSAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
HNHASAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
HNCASAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
HNCACBSAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
CBCACONHSAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
CCCTOCSYNHSAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
CBCACOCAHASAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
HCCH-COSYSAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
HCCH-TOCSYSAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
15N-NOESYSAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1
13C-NOESYSAMPLE_1not availableEXPERIMENTAL_CONDITIONS_1

Software:

No software information available

NMR spectrometers:

  • VARIAN Inova 600 MHz

Related Database Links:

PDB
DBJ GAA25341
EMBL CAA89110 CAY81710
GB AHY76360 EDN64286 EDV11404 EEU05288 EGA57470
REF NP_013599
SP Q03759
TPG DAA09790
AlphaFold Q03759

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks