BMRB Entry 5516

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PDB ID: 1rsf
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5516
MolProbity Validation Chart

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Assignment of the 1H, 13C and 15N resonances of the Coxsackievirus and Adenovirus receptor domain 1

Deposition date:

2002-09-10

Original release date:

2004-02-20

Authors:

Jiang, Shaokai; Caffrey, Michael

Citation:

Citation: Jiang, Shaokai; Caffrey, Michael. "Letter to the Editor: Assignment of the 1H, 13C and 15N Resonances of the Coxsackievirus and Adenovirus Receptor Domain 1" J. Biomol. NMR 24, 365-366 (2002).
PubMed: 12522304

Assembly members:

Assembly members:
Coxsackievirus and Adenovirus, polymer, 126 residues, 13741 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Coxsackievirus and Adenovirus: GSSITTPEEMIEKAKGETAY LPCKFTLSPEDQGPLDIEWL ISPADNQKVDQVIILYSGDK IYDDYYPDLKGRVHFTSNDL KSGDASINVTNLQLSDIGTY QCKVKKAPGVANKKIHLVVL VKPSGA

Data sets:

assigned_chemical_shifts
- chemical_shift

Data type	Count
13C chemical shifts	560
15N chemical shifts	128
1H chemical shifts	903

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	CAR-d1 monomer	1

Entities:

Entity 1, CAR-d1 monomer 126 residues - 13741 Da.

1

GLY

SER

ILE

THR

PRO

GLU

MET

2

ILE

GLU

LYS

ALA

LYS

GLY

GLU

THR

ALA

TYR

3

LEU

PRO

CYS

LYS

PHE

THR

LEU

SER

PRO

GLU

4

ASP

GLN

GLY

PRO

LEU

ASP

ILE

GLU

TRP

LEU

5

ILE

SER

PRO

ALA

ASP

ASN

GLN

LYS

VAL

ASP

6

GLN

VAL

ILE

LEU

TYR

SER

GLY

ASP

LYS

7

ILE

TYR

ASP

TYR

PRO

ASP

LEU

LYS

8

GLY

ARG

VAL

HIS

PHE

THR

SER

ASN

ASP

LEU

9

LYS

SER

GLY

ASP

ALA

SER

ILE

ASN

VAL

THR

10

ASN

LEU

GLN

LEU

SER

ASP

ILE

GLY

THR

TYR

11

GLN

CYS

LYS

VAL

LYS

ALA

PRO

GLY

VAL

12

ALA

ASN

LYS

ILE

HIS

LEU

VAL

LEU

13

VAL

LYS

PRO

SER

GLY

ALA

Samples:

15N-labled_sample: Coxsackievirus and Adenovirus, [U-95% 15N], 0.8 – 1.2 mM; formate, [U-2H], 50 mM

13C_N15-labeled: Coxsackievirus and Adenovirus, [U-90% 13C; U-90% N15], 0.9 – 1.2 mM; formate, [U-2H], 50 mM

exp_condition_1: pH: 3.0; temperature: 295 K

Experiments:

Name	Sample	Sample state	Sample conditions
HNCA	not available	not available	not available
HN(CO)CA	not available	not available	not available
HNCACB	not available	not available	not available
CBCA(CO)NH	not available	not available	not available
HNCO	not available	not available	not available
H(C)CH-TOCSY	not available	not available	not available
(H)CCH-TOCSY	not available	not available	not available
CC(CO)NH	not available	not available	not available
1H-1H TOCSY	not available	not available	not available
1H-1H NOESY	not available	not available	not available
1H-15N NOESY	not available	not available	not available
1H-15N TOCSY	not available	not available	not available
1H-13C NOESY	not available	not available	not available

Software:

nmrPipe -

NMR spectrometers:

Bruker DRX 600 MHz

PDB	1EAJ 1F5W 1JEW 1KAC 1P69 1P6A 1RSF 2J12 2J1K
DBJ	BAG36305
EMBL	CAA68868 CAH92396
GenBank	AAC51234 AAD31772 AAF05908 AAF24344 AAG01088
REF	NP_001329 XP_001155969 XP_001156087 XP_531394
SWISS-PROT	P78310 Q5R764