BMRB Entry 5474
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5474
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NMR-STAR v3 text file.
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Citation: Meier, Sebastian; Li, Yu-Chin; Koehn, James; Vlattas, Isidoros; Wareing, James; Jahnke, Wolfgang; Wennogle, Lawrence; Grzesiek, Stephan. "Letter to the Editor: Backbone resonance assignment of the 298 amino acid
catalytic domain of protein tyrosine phosphatase 1B (PTP1B)" J. Biomol. NMR 24, 165-166 (2002).
Assembly members:
protein tyrosine phosphatase 1B, polymer, 298 residues, 34672 Da.
DADEXLIP-amide,(X=phenylalanine-p-difluoromethyl phosphonate), polymer, 8 residues, 34672 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET 19-b
Entity Sequences (FASTA):
protein tyrosine phosphatase 1B: MEMEKEFEQIDKSGSWAAIY
QDIRHEASDFPCRVAKLPKN
KNRNRYRDVSPFDHSRIKLH
QEDNDYINASLIKMEEAQRS
YILTQGPLPNTCGHFWEMVW
EQKSRGVVMLNRVMEKGSLK
CAQYWPQKEEKEMIFEDTNL
KLTLISEDIKSYYTVRQLEL
ENLTTQETREILHFHYTTWP
DFGVPESPASFLNFLFKVRE
SGSLSPEHGPVVVHCSAGIG
RSGTFCLADTCLLLMDKRKD
PSSVDIKKVLLEMRKFRMGL
IQTADQLRFSYLAVIEGAKF
IMGDSSVQDQWKELSHED
DADEXLIP-amide,(X=phenylalanine-p-difluoromethyl phosphonate): DADEXLIP
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 218 |
| 13C chemical shifts | 697 |
| 15N chemical shifts | 218 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | protein tyrosine phosphatase 1B | 1 |
| 2 | DADEXLIP-amide,(X=phenylalanine-p-difluoromethyl phosphonate) | 2 |
Entities:
Entity 1, protein tyrosine phosphatase 1B 298 residues - 34672 Da.
| 1 | MET | GLU | MET | GLU | LYS | GLU | PHE | GLU | GLN | ILE | ||||
| 2 | ASP | LYS | SER | GLY | SER | TRP | ALA | ALA | ILE | TYR | ||||
| 3 | GLN | ASP | ILE | ARG | HIS | GLU | ALA | SER | ASP | PHE | ||||
| 4 | PRO | CYS | ARG | VAL | ALA | LYS | LEU | PRO | LYS | ASN | ||||
| 5 | LYS | ASN | ARG | ASN | ARG | TYR | ARG | ASP | VAL | SER | ||||
| 6 | PRO | PHE | ASP | HIS | SER | ARG | ILE | LYS | LEU | HIS | ||||
| 7 | GLN | GLU | ASP | ASN | ASP | TYR | ILE | ASN | ALA | SER | ||||
| 8 | LEU | ILE | LYS | MET | GLU | GLU | ALA | GLN | ARG | SER | ||||
| 9 | TYR | ILE | LEU | THR | GLN | GLY | PRO | LEU | PRO | ASN | ||||
| 10 | THR | CYS | GLY | HIS | PHE | TRP | GLU | MET | VAL | TRP | ||||
| 11 | GLU | GLN | LYS | SER | ARG | GLY | VAL | VAL | MET | LEU | ||||
| 12 | ASN | ARG | VAL | MET | GLU | LYS | GLY | SER | LEU | LYS | ||||
| 13 | CYS | ALA | GLN | TYR | TRP | PRO | GLN | LYS | GLU | GLU | ||||
| 14 | LYS | GLU | MET | ILE | PHE | GLU | ASP | THR | ASN | LEU | ||||
| 15 | LYS | LEU | THR | LEU | ILE | SER | GLU | ASP | ILE | LYS | ||||
| 16 | SER | TYR | TYR | THR | VAL | ARG | GLN | LEU | GLU | LEU | ||||
| 17 | GLU | ASN | LEU | THR | THR | GLN | GLU | THR | ARG | GLU | ||||
| 18 | ILE | LEU | HIS | PHE | HIS | TYR | THR | THR | TRP | PRO | ||||
| 19 | ASP | PHE | GLY | VAL | PRO | GLU | SER | PRO | ALA | SER | ||||
| 20 | PHE | LEU | ASN | PHE | LEU | PHE | LYS | VAL | ARG | GLU | ||||
| 21 | SER | GLY | SER | LEU | SER | PRO | GLU | HIS | GLY | PRO | ||||
| 22 | VAL | VAL | VAL | HIS | CYS | SER | ALA | GLY | ILE | GLY | ||||
| 23 | ARG | SER | GLY | THR | PHE | CYS | LEU | ALA | ASP | THR | ||||
| 24 | CYS | LEU | LEU | LEU | MET | ASP | LYS | ARG | LYS | ASP | ||||
| 25 | PRO | SER | SER | VAL | ASP | ILE | LYS | LYS | VAL | LEU | ||||
| 26 | LEU | GLU | MET | ARG | LYS | PHE | ARG | MET | GLY | LEU | ||||
| 27 | ILE | GLN | THR | ALA | ASP | GLN | LEU | ARG | PHE | SER | ||||
| 28 | TYR | LEU | ALA | VAL | ILE | GLU | GLY | ALA | LYS | PHE | ||||
| 29 | ILE | MET | GLY | ASP | SER | SER | VAL | GLN | ASP | GLN | ||||
| 30 | TRP | LYS | GLU | LEU | SER | HIS | GLU | ASP |
Entity 2, DADEXLIP-amide,(X=phenylalanine-p-difluoromethyl phosphonate) 8 residues - 34672 Da.
| 1 | ASP | ALA | ASP | GLU | X | LEU | ILE | PRO |
Samples:
sample_1: protein tyrosine phosphatase 1B, [U-100% 15N; U-100% 13C], 0.5 mM; DADEXLIP 1 mM; H2O 30%; D2O 70%
Ex-cond_1: pH: 7.5; temperature: 293 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| HN(CO)CA | sample_1 | not available | Ex-cond_1 |
| HN(CA)CO | sample_1 | not available | Ex-cond_1 |
| HN(CO)CACB | sample_1 | not available | Ex-cond_1 |
| HNCACB | sample_1 | not available | Ex-cond_1 |
| HNCA | sample_1 | not available | Ex-cond_1 |
| HNCO | sample_1 | not available | Ex-cond_1 |
| HN(CO)CA TROSY | sample_1 | not available | Ex-cond_1 |
| HN(CA)CO TROSY | sample_1 | not available | Ex-cond_1 |
| HN(CO)CACB TROSY | sample_1 | not available | Ex-cond_1 |
| HNCACB TROSY | sample_1 | not available | Ex-cond_1 |
| HNCA TROSY | sample_1 | not available | Ex-cond_1 |
| HNCO TROSY | sample_1 | not available | Ex-cond_1 |
| 15N-edited NOESY | sample_1 | not available | Ex-cond_1 |
Software:
nmrPIPE -
NMR spectrometers:
- Bruker DRX 600 MHz
- Bruker DRX 800 MHz
Related Database Links:
| SWISS-PROT | P18031 |
| REF | XP_001096412 XP_001096290 XP_001096168 XP_001096053 NP_002818 |
| GenBank | AAP35398 AAH18164 AAH15660 AAA60223 AAA60157 |
| EMBL | CAI23215 CAH90487 CAC00618 |
| DBJ | BAG61697 BAG38152 BAG11007 BAF83327 |
| PDB |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks