BMRB Entry 5459
Click here to enlarge.
PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5459
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Katoh, Shizue; Hong, Cui; Tsunoda, Yuki; Murata, Katsuyoshi; Takai, Ryota; Minami, Eiichi; Yamazaki, Toshimasa; Katoh, Etsuko. "High Precision NMR Structure and Function of the RING-H2 Finger Domain of EL5,
a Rice Protein whose Expression is Increased upon Exposure to Pathogen-derived
Oligosaccahrides" J. Biol. Chem. 278, 15341-15348 (2003).
PubMed: 12588869
Assembly members:
RING-H2 finger domain, polymer, 55 residues, Formula weight is not available
Natural source: Common Name: Rice Taxonomy ID: 4530 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Olyza sativa
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
RING-H2 finger domain: AMDDGVECAVCLAELEDGEE
ARFLPRCGHGFHAECVDMWL
GSHSTCPLCRLTVVV
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 233 |
| 15N chemical shifts | 51 |
| 1H chemical shifts | 349 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Ubiquitine-conjugate enzyme binding domain | 1 |
Entities:
Entity 1, Ubiquitine-conjugate enzyme binding domain 55 residues - Formula weight is not available
| 1 | ALA | MET | ASP | ASP | GLY | VAL | GLU | CYS | ALA | VAL | ||||
| 2 | CYS | LEU | ALA | GLU | LEU | GLU | ASP | GLY | GLU | GLU | ||||
| 3 | ALA | ARG | PHE | LEU | PRO | ARG | CYS | GLY | HIS | GLY | ||||
| 4 | PHE | HIS | ALA | GLU | CYS | VAL | ASP | MET | TRP | LEU | ||||
| 5 | GLY | SER | HIS | SER | THR | CYS | PRO | LEU | CYS | ARG | ||||
| 6 | LEU | THR | VAL | VAL | VAL |
Samples:
sample_1: RING-H2 finger domain, [U-13C; U-15N], mM
Ex-cond_1: pH: 7.0; temperature: 308 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| NMR_applied_experiment | sample_1 | not available | Ex-cond_1 |
Software:
No software information available
NMR spectrometers:
- unknown unknown 0 MHz
Related Database Links:
| PDB | |
| DBJ | BAA96874 BAD16530 BAD16534 BAD16538 BAD16542 |
| GB | EAZ23461 |
| REF | NP_001047149 |
| SP | Q9LRB7 |
| AlphaFold | Q9LRB7 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks