BMRB Entry 5391

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5391

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

The NMR Solution Structure of the RIP Death Domain and Characterization of the Interaction with TRADD

Deposition date:

2002-06-10

Original release date:

2003-07-30

Authors:

Sukits, S.; Telliez, J.; Malakian, K.; Hsu, S.; Lin, L.; Xu, G.

Citation:

Citation: Sukits, S.; Lin, L.; Hsu, S.; Malakian, K.; Powers, R.; Xu, G.. "Solution Structure of the Tumor Necrosis Factor Receptor-1 Death Domain " J. Mol. Biol. 310, 895-906 (2001).
PubMed: 11453696

Assembly members:

Assembly members:
Receptor-Interacting Serine/Threonine Protein Kinase 2, polymer, 112 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Receptor-Interacting Serine/Threonine Protein Kinase 2: MHHHHHHMAIFDNTTSLTDK HLDPIRENLGKHWKNCARKL GFTQSQIDEIDHDYERDGLK EKVYQMLQKWVMREGIKGAT VGKLAQALHQCSRIDLLSSL IYVSQNHHHHHH

Data sets:

assigned_chemical_shifts
- chemical_shift_set_1

Data type	Count
1H chemical shifts	646
13C chemical shifts	374
15N chemical shifts	104

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Receptor-Interacting Serine/Threonine Protein Kinase 2	1

Entities:

Entity 1, Receptor-Interacting Serine/Threonine Protein Kinase 2 112 residues - Formula weight is not available

1

MET

HIS

MET

ALA

ILE

2

PHE

ASP

ASN

THR

SER

LEU

THR

ASP

LYS

3

HIS

LEU

ASP

PRO

ILE

ARG

GLU

ASN

LEU

GLY

4

LYS

HIS

TRP

LYS

ASN

CYS

ALA

ARG

LYS

LEU

5

GLY

PHE

THR

GLN

SER

GLN

ILE

ASP

GLU

ILE

6

ASP

HIS

ASP

TYR

GLU

ARG

ASP

GLY

LEU

LYS

7

GLU

LYS

VAL

TYR

GLN

MET

LEU

GLN

LYS

TRP

8

VAL

MET

ARG

GLU

GLY

ILE

LYS

GLY

ALA

THR

9

VAL

GLY

LYS

LEU

ALA

GLN

ALA

LEU

HIS

GLN

10

CYS

SER

ARG

ILE

ASP

LEU

SER

LEU

11

ILE

TYR

VAL

SER

GLN

ASN

HIS

12

HIS

Samples:

sample_1: Receptor-Interacting Serine/Threonine Protein Kinase 2, [U-15N], 0.75 – 1 mM; acetate 50 mM; NaCl 250 mM; DTT 20 mM

sample_2: Receptor-Interacting Serine/Threonine Protein Kinase 2, [U-13C; U-15N], 0.75 – 1 mM; acetate 50 mM; NaCl 250 mM; DTT 20 mM

sample_cond_1: pH: 4.5; temperature: 309 K; ionic strength: 250 mM; pressure: 1 atm

Experiments:

Name	Sample	Sample state	Sample conditions
3D 15N-separated NOESY	not available	not available	not available

Software:

X-PLOR v98.0 - structure solution

NMRPipe v2.1, Rev 2001.193.18.33 - processing

PIPP v4.2.2, 1998 - data analysis

NMR spectrometers:

Varian UNITYplus 600 MHz

DBJ	BAD92163 BAG36858 BAG53315 BAG65471
GB	AAC32232 AAC50137 AAI26255 AAI26257 AAT74626
PRF	2112225A
REF	NP_003795 XP_001160973 XP_002816403 XP_003805603 XP_005249514
SP	Q13546
AlphaFold	Q13546