BMRB Entry 53637
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR53637
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
All files associated with the entry
Citation: Szekely, Or; Lee, Yeongjoon; Rangadurai, Atul; Guseva, Serafima; Cooksey, Joshua; Faison, Edgar; Zalenski, Nikita; Zhang, Qi; Suo, Zucai; Al-Hashimi, Hashim. "Assessing the contribution of rare DNA states to cancer mutational signatures using sequence-specific conformational fingerprinting" Nat. Commun. ., .-..
Assembly members:
entity_1, polymer, 19 residues, 5850 Da.
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
entity_1: GCAATGGCGAAGCCGTTGC
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 116 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | ATG-GT-DNA-hairpin | 1 |
Entities:
Entity 1, ATG-GT-DNA-hairpin 19 residues - 5850 Da.
DNA hairpin
| 1 | DG | DC | DA | DA | DT | DG | DG | DC | DG | DA | ||||
| 2 | DA | DG | DC | DC | DG | DT | DT | DG | DC |
Samples:
sample_1: ATG-GT 0.85 mM; sodium phosphate buffer 15 mM; sodium chloride 25 mM; EDTA 0.1 mM
sample_conditions_1: ionic strength: 50 mM; pH: 6.8; pressure: 1 atm; temperature: 274.15 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
Software:
NMRDraw v2023.129.13.28 - processing
NMRFAM-SPARKY v1.470 - chemical shift assignment
NMR spectrometers:
- Bruker AVANCE III 600 MHz