BMRB Entry 5347
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PDB ID: 1o1w
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5347
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Pari, Koteppa; Mueller, Geoffrey; DeRose, Eugene; Kirby, Thomas; London, Robert. "Solution Structure of the RNase H Domain of the HIV-1 Reverse Transcriptase in
the Presence of Magnesium" Biochemistry 42, 639-650 (2003).
PubMed: 12534276
Assembly members:
HIV-1 RNase H, polymer, 138 residues, 15243 Da.
MG, non-polymer, 24.305 Da.
Natural source: Common Name: Human immunodeficiency virus type 1 (HXB2 isolate) Taxonomy ID: 11706 Superkingdom: Viruses Kingdom: not available Genus/species: Lentivirus Human immunodeficincy virus type 1
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
HIV-1 RNase H: MNELYQLEKEPIVGAETFYV
DGAANRETKLGKAGYVTNRG
RQKVVTLTDTTNQKTELQAI
YLALQDSGLEVNIVTDSQYA
LGIIQAQPDQSESELVNQII
EQLIKKEKVYLAWVPAHKGI
GGNEQVDKLVSAGIRKVL
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 912 |
| 13C chemical shifts | 552 |
| 15N chemical shifts | 139 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | HIV-1 RT | 1 |
| 2 | Magnesium ion | 2 |
Entities:
Entity 1, HIV-1 RT 138 residues - 15243 Da.
| 1 | MET | ASN | GLU | LEU | TYR | GLN | LEU | GLU | LYS | GLU | ||||
| 2 | PRO | ILE | VAL | GLY | ALA | GLU | THR | PHE | TYR | VAL | ||||
| 3 | ASP | GLY | ALA | ALA | ASN | ARG | GLU | THR | LYS | LEU | ||||
| 4 | GLY | LYS | ALA | GLY | TYR | VAL | THR | ASN | ARG | GLY | ||||
| 5 | ARG | GLN | LYS | VAL | VAL | THR | LEU | THR | ASP | THR | ||||
| 6 | THR | ASN | GLN | LYS | THR | GLU | LEU | GLN | ALA | ILE | ||||
| 7 | TYR | LEU | ALA | LEU | GLN | ASP | SER | GLY | LEU | GLU | ||||
| 8 | VAL | ASN | ILE | VAL | THR | ASP | SER | GLN | TYR | ALA | ||||
| 9 | LEU | GLY | ILE | ILE | GLN | ALA | GLN | PRO | ASP | GLN | ||||
| 10 | SER | GLU | SER | GLU | LEU | VAL | ASN | GLN | ILE | ILE | ||||
| 11 | GLU | GLN | LEU | ILE | LYS | LYS | GLU | LYS | VAL | TYR | ||||
| 12 | LEU | ALA | TRP | VAL | PRO | ALA | HIS | LYS | GLY | ILE | ||||
| 13 | GLY | GLY | ASN | GLU | GLN | VAL | ASP | LYS | LEU | VAL | ||||
| 14 | SER | ALA | GLY | ILE | ARG | LYS | VAL | LEU |
Entity 2, Magnesium ion - Mg - 24.305 Da.
| 1 | MG |
Related Database Links:
| BMRB | 4093 5931 5932 |
| PDB | 1C0T 1C0U 1C1B 1C1C 1DTQ 1DTT 1EP4 1FK9 1FKO 1FKP 1JKH 1JLA 1JLB 1JLC 1JLE 1JLF 1JLG 1JLQ 1KLM 1LW0 1LW2 1LWC 1LWE 1LWF 1O1W 1REV 1RT1 1RT2 1RT3 1RT4 1RT5 1RT6 1RT7 1RTH 1RTI 1RTJ 1S1T 1S1U 1S1V 1S1W 1S1X 1TKT 1TKX 1TKZ 1TL1 1TL3 1VRT 1VRU 2HND 2HNY 2HNZ 2JLE 2OPP 2OPQ 2OPR 2OPS 2RF2 2RKI 2WOM 2WON 2YNF 2YNG 2YNH 2YNI 3BGR 3C6T 3C6U 3DI6 3DLE 3DLG 3DM2 3DMJ 3DOK 3DOL 3DRP 3DRR 3DRS 3DYA 3E01 3FFI 3I0R 3I0S 3KJV 3KK1 3KK2 3KK3 3KLE 3KLG 3KLI 3LAK 3LAL 3LAM 3LAN 3LP0 3LP1 3LP2 3M8P 3M8Q 3MEC 3MED 3MEE 3MEG 3NBP 3QIP 3T19 3T1A 3TAM 4B3O 4I2Q 4I7F 4KV8 4NCG 4QAG |
| DBJ | BAA12997 BAH96515 BAH96524 |
| GB | AAA93161 AAA93162 AAA93165 AAB05599 AAB50259 |
| PIR | GNVWLV |
| REF | NP_057849 NP_705927 NP_789740 YP_001856242 |
| SP | P03367 P04585 |
| AlphaFold | P03367 P04585 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks