BMRB Entry 5346

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PDB ID: 1l3x
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5346
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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of a Novel Disintegrin, Salmosin from Agkistrondon halys Venom

Deposition date:

2002-04-19

Original release date:

2004-02-12

Authors:

Shin, Joon; Hong, Sung-Yu; Chung, Kwanghoe; Kang, Incheol; Jang, Yangsoo; Kim, Doo-sik; Lee, Weontae

Citation:

Citation: Shin, Joon; Hong, Sung-Yu; Chung, Kwanghoe; Kang, Incheol; Jang, Yangsoo; Kim, Doo-sik; Lee, Weontae. "Solution Structure of a Novel Disintegrin, Salmosin from Agkistrondon halys Venom" Biochemistry 42, 14408-14415 (2003).
PubMed: 14661951

Assembly members:

Assembly members:
salmosin, polymer, 73 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Korean snake Taxonomy ID: 8714 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Agkistrondon halys

Experimental source:

Experimental source: Production method: purified from the natural source

Entity Sequences (FASTA):

Entity Sequences (FASTA):
salmosin: EAGEECDCGSPGNPCCDAAT CKLRQGAQCAEGLCCDQCRF MKEGTICRRARGDDLDDYCN GISAGCPRNPFHA

Data sets:

assigned_chemical_shifts
- chemical_shift_set_1

Data type	Count
1H chemical shifts	391

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	platelet aggregation inhibitor disintegrin	1

Entities:

Entity 1, platelet aggregation inhibitor disintegrin 73 residues - Formula weight is not available

1

GLU

ALA

GLY

GLU

CYS

ASP

CYS

GLY

SER

2

PRO

GLY

ASN

PRO

CYS

ASP

ALA

THR

3

CYS

LYS

LEU

ARG

GLN

GLY

ALA

GLN

CYS

ALA

4

GLU

GLY

LEU

CYS

ASP

GLN

CYS

ARG

PHE

5

MET

LYS

GLU

GLY

THR

ILE

CYS

ARG

ALA

6

ARG

GLY

ASP

LEU

ASP

TYR

CYS

ASN

7

GLY

ILE

SER

ALA

GLY

CYS

PRO

ARG

ASN

PRO

8

PHE

HIS

ALA

Samples:

sample_1: salmosin 1.0 mM; H2O 90%; D2O 10%

experimental_conditions: ionic strength: 50 mM; pH: 7; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D NOESY	not available	not available	not available
DQF-COSY	not available	not available	not available
2D TOCSY	not available	not available	not available

Software:

XWINNMR v2.6 - collection, processing

CNS v1.0 - refinement

Sparky v3.1 - data analysis

NMR spectrometers:

Bruker DRX 600 MHz
Bruker DRX 500 MHz

PDB	1L3X
GenBank	AAC08997 AAD02653 AAK73517
SWISS-PROT	O73795 Q90WC0