BMRB Entry 53260

Name: HypB-NTEw Backbone plus Cb
Published: 2025-07-29

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR53260

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

HypB-NTEw Backbone plus Cb

Deposition date:

2025-07-08

Original release date:

2025-07-29

Authors:

Law, Wayne; Pichugin, Dmitry; Zamble, Deborah; Kanelis, Voula

Citation:

Citation: Law, Wayne; Pichugin, Dmitry; Muhandiram, Ranjith; Zamble, Deborah; Kanelis, Voula. "Structural investigations connect the disordered N-terminal extension of HypB to the activities of HypB and SlyD in E. coli" Protein Sci. 34, e70231-e70231 (2025).
PubMed: 40698646

Assembly members:

Assembly members:
entity_1, polymer, 77 residues, Formula weight is not available

Natural source:

Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET-His6-SUMO-NTE

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: MCTTCGCGEGNLYIEGDEHN PHSAFRSAPFAPAARPKMKI TGIKAPEFTPSQTEEGDLHY GHGEAGTHAPGMSQRRW

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	214
15N chemical shifts	66
1H chemical shifts	66

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	HypB-NTEw	1

Entities:

Entity 1, HypB-NTEw 77 residues - Formula weight is not available

1

MET

CYS

THR

CYS

GLY

CYS

GLY

GLU

GLY

2

ASN

LEU

TYR

ILE

GLU

GLY

ASP

GLU

HIS

ASN

3

PRO

HIS

SER

ALA

PHE

ARG

SER

ALA

PRO

PHE

4

ALA

PRO

ALA

ARG

PRO

LYS

MET

LYS

ILE

5

THR

GLY

ILE

LYS

ALA

PRO

GLU

PHE

THR

PRO

6

SER

GLN

THR

GLU

GLY

ASP

LEU

HIS

TYR

7

GLY

HIS

GLY

GLU

ALA

GLY

THR

HIS

ALA

PRO

8

GLY

MET

SER

GLN

ARG

TRP

Samples:

sample_1: HypB-NTEw, [U-99% 13C; U-99% 15N], 470 uM; 4-(2-hydroxyethyl)piperazine-1-ethanesulfonic acid[HEPES] 25 mM; NaCl 200 mM; glycerol 2.5%; TCEP 1 mM; benzamidine 500 uM; 6-aminocaproic acid 500 uM

sample_conditions_1: ionic strength: 105 mM; pH: 7.2; temperature: 277 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCACO	sample_1	isotropic	sample_conditions_1
3D CCC-TOCSY-NNH	sample_1	isotropic	sample_conditions_1

Software:

VNMRj - collection

NMRPipe - processing

NMRViewJ - chemical shift assignment

NMR spectrometers:

Agilent VNMRS 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks