BMRB Entry 53112

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR53112

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Title:
Progesterone Receptor Activation Domain (PR AD)
Deposition date:
2025-05-05
Original release date:
2026-01-06
Authors:
Bielskute, Stase; Garcia-Cabau, Carla; Garcia, Jesus; Bracaglia, Lorenzo; Salvatella, Xavier
Citation:

Citation: Bielskute, Stase; Mateos, Borja; Awawdy, Muhammad; Garcia-Cabau, Carla; Niskanen, Henri; Sanchez-Zarzalejo, Carolina; Bracaglia, Lorenzo; Pierattelli, Roberta; Felli, Isabella; Frigole-Vivas, Marta; Garcia, Jesus; Riera, Antoni; Hnisz, Denes; Salvatella, Xavier. "Oligomerization enables the selective targeting of an intrinsically disordered region by a small molecule"  Sci. Adv. ., .-..

Assembly members:

Assembly members:
entity_1, polymer, 567 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pDEST17

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: GMTELKAKGPRAPHVAGGPP SPEVGSPLLCRPAAGPFPGS QTSDTLPEVSAIPISLDGLL FPRPCQGQDPSDEKTQDQQS LSDVEGAYSRAEATRGAGGS SSSPPEKDSGLLDSVLDTLL APSGPGQSQPSPPACEVTSS WCLFGPELPEDPPAAPATQR VLSPLMSRSGCKVGDSSGTA AAHKVLPRGLSPARQLLLPA SESPHWSGAPVKPSPQAAAV EVEEEDGSESEESAGPLLKG KPRALGGAAAGGGAAAVPPG AAAGGVALVPKEDSRFSAPR VALVEQDAPMAPGRSPLATT VMDFIHVPILPLNHALLAAR TRQLLEDESYDGGAGAASAF APPRSSPCASSTPVAVGDFP DCAYPPDAEPKDDAYPLYSD FQPPALKIKEEEEGAEASAR SPRSYLVAGANPAAFPDFPL GPPPPLPPRATPSRPGEAAV TAAPASASVSSASSSGSTLE CILYKAEGAPPQQGPFAPPP CKAPGASGCLLPRDGLPSTS ASAAAAGAAPALYPALGLNG LPQLGYQAAVLKEGLPQVYP PYLNYLRPDSEASQSPQYSF ESLPQKI

Data sets:
Data typeCount
13C chemical shifts1446
15N chemical shifts439
1H chemical shifts439

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1PR AD1

Entities:

Entity 1, PR AD 567 residues - Formula weight is not available

1   GLYMETTHRGLULEULYSALALYSGLYPRO
2   ARGALAPROHISVALALAGLYGLYPROPRO
3   SERPROGLUVALGLYSERPROLEULEUCYS
4   ARGPROALAALAGLYPROPHEPROGLYSER
5   GLNTHRSERASPTHRLEUPROGLUVALSER
6   ALAILEPROILESERLEUASPGLYLEULEU
7   PHEPROARGPROCYSGLNGLYGLNASPPRO
8   SERASPGLULYSTHRGLNASPGLNGLNSER
9   LEUSERASPVALGLUGLYALATYRSERARG
10   ALAGLUALATHRARGGLYALAGLYGLYSER
11   SERSERSERPROPROGLULYSASPSERGLY
12   LEULEUASPSERVALLEUASPTHRLEULEU
13   ALAPROSERGLYPROGLYGLNSERGLNPRO
14   SERPROPROALACYSGLUVALTHRSERSER
15   TRPCYSLEUPHEGLYPROGLULEUPROGLU
16   ASPPROPROALAALAPROALATHRGLNARG
17   VALLEUSERPROLEUMETSERARGSERGLY
18   CYSLYSVALGLYASPSERSERGLYTHRALA
19   ALAALAHISLYSVALLEUPROARGGLYLEU
20   SERPROALAARGGLNLEULEULEUPROALA
21   SERGLUSERPROHISTRPSERGLYALAPRO
22   VALLYSPROSERPROGLNALAALAALAVAL
23   GLUVALGLUGLUGLUASPGLYSERGLUSER
24   GLUGLUSERALAGLYPROLEULEULYSGLY
25   LYSPROARGALALEUGLYGLYALAALAALA
26   GLYGLYGLYALAALAALAVALPROPROGLY
27   ALAALAALAGLYGLYVALALALEUVALPRO
28   LYSGLUASPSERARGPHESERALAPROARG
29   VALALALEUVALGLUGLNASPALAPROMET
30   ALAPROGLYARGSERPROLEUALATHRTHR
31   VALMETASPPHEILEHISVALPROILELEU
32   PROLEUASNHISALALEULEUALAALAARG
33   THRARGGLNLEULEUGLUASPGLUSERTYR
34   ASPGLYGLYALAGLYALAALASERALAPHE
35   ALAPROPROARGSERSERPROCYSALASER
36   SERTHRPROVALALAVALGLYASPPHEPRO
37   ASPCYSALATYRPROPROASPALAGLUPRO
38   LYSASPASPALATYRPROLEUTYRSERASP
39   PHEGLNPROPROALALEULYSILELYSGLU
40   GLUGLUGLUGLYALAGLUALASERALAARG
41   SERPROARGSERTYRLEUVALALAGLYALA
42   ASNPROALAALAPHEPROASPPHEPROLEU
43   GLYPROPROPROPROLEUPROPROARGALA
44   THRPROSERARGPROGLYGLUALAALAVAL
45   THRALAALAPROALASERALASERVALSER
46   SERALASERSERSERGLYSERTHRLEUGLU
47   CYSILELEUTYRLYSALAGLUGLYALAPRO
48   PROGLNGLNGLYPROPHEALAPROPROPRO
49   CYSLYSALAPROGLYALASERGLYCYSLEU
50   LEUPROARGASPGLYLEUPROSERTHRSER
51   ALASERALAALAALAALAGLYALAALAPRO
52   ALALEUTYRPROALALEUGLYLEUASNGLY
53   LEUPROGLNLEUGLYTYRGLNALAALAVAL
54   LEULYSGLUGLYLEUPROGLNVALTYRPRO
55   PROTYRLEUASNTYRLEUARGPROASPSER
56   GLUALASERGLNSERPROGLNTYRSERPHE
57   GLUSERLEUPROGLNLYSILE

Samples:

sample_1: PR AD, [U-100% 13C; U-100% 15N], 200 uM; D2O, [U-100% 2H], 8%; DSS 5 uM; sodium azide 0.05%; sodium phosphate 20 mM; TCEP 1 mM

sample_conditions_1: ionic strength: 50 mM; pH: 5.8; pressure: 1 atm; temperature: 278 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1
3D HNCAsample_1isotropicsample_conditions_1
3D HN(CA)COsample_1isotropicsample_conditions_1
3D HNCACBsample_1isotropicsample_conditions_1
3D HN(CO)CACBsample_1isotropicsample_conditions_1
3D HN(CO)CAsample_1isotropicsample_conditions_1
3D HN(COCA)NNHsample_1isotropicsample_conditions_1
4D HNCACOsample_1isotropicsample_conditions_1

Software:

CcpNMR - chemical shift assignment, data analysis

TOPSPIN - collection

NMRPipe - processing

qMDD - processing

NMR spectrometers:

  • Bruker AVANCE III 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks