BMRB Entry 52624

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR52624

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Title:
The raw NMR data of Z-form DNA-RNA hybrid
Deposition date:
2024-10-03
Original release date:
2025-07-03
Authors:
Xu, Yan
Citation:

Citation: Xu, Yan. "Raw NMR data"  Nucleic Acids Res. ., .-..

Assembly members:

Assembly members:
entity_1, polymer, 8 residues, Formula weight is not available
entity_2, polymer, 8 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: CGCACGCG
entity_2: CGCGUGCG

Data sets:
Data typeCount
1H chemical shifts142

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1DNA chain1
2RNA chain2

Entities:

Entity 1, DNA chain 8 residues - Formula weight is not available

1   DCDGDCDADCDGDCDG

Entity 2, RNA chain 8 residues - Formula weight is not available

1   CGCGUGCG

Samples:

sample_1: DNA chain 5 mM; RNA chain 5 mM; KCl 100 mM

sample_conditions_1: ionic strength: 100 mM; pH: 7.0; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H NOESYsample_1isotropicsample_conditions_1

Software:

MestReNova - data analysis

NMR spectrometers:

  • Bruker Unity 400 MHz