BMRB Entry 5238

Click here to enlarge.

PDB ID: 1kmx
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5238
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Title:
1H and 15N chemical shift assignments for the heparin-binding domain of vascular endothelial growth factor
Deposition date:
2001-12-18
Original release date:
2002-02-08
Authors:
Fairbrother, Wayne; Champe, Mark; Christinger, Hans; Keyt, Bruce; Starovasnik, Melissa
Citation:

Citation: Fairbrother, Wayne; Champe, Mark; Christinger, Hans; Keyt, Bruce; Starovasnik, Melissa. "Solution structure of the heparin-binding domain of vascular endothelial growth factor"  Structure 6, 637-649 (1998).
PubMed: 9634701

Assembly members:

Assembly members:
vascular endothelial growth factor, polymer, 55 residues, 6477 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
vascular endothelial growth factor: ARQENPCGPCSERRKHLFVQ DPQTCKCSCKNTDSRCKARQ LELNERTCRCDKPRR

Data sets:
Data typeCount
15N chemical shifts55
1H chemical shifts359

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1VEGF heparin-binding domain1

Entities:

Entity 1, VEGF heparin-binding domain 55 residues - 6477 Da.

1   ALAARGGLNGLUASNPROCYSGLYPROCYS
2   SERGLUARGARGLYSHISLEUPHEVALGLN
3   ASPPROGLNTHRCYSLYSCYSSERCYSLYS
4   ASNTHRASPSERARGCYSLYSALAARGGLN
5   LEUGLULEUASNGLUARGTHRCYSARGCYS
6   ASPLYSPROARGARG

Related Database Links:

PDB 1KMX 1VGH 2VGH
DBJ BAA78418 BAB20890 BAB68520
EMBL CAA09179 CAA44447 CAA57143 CAB82426 CAC19512
GenBank AAA30502 AAA30804 AAA35789 AAA36804 AAA36807
PRF 2105202A
REF NP_001003175 NP_001009854 NP_001020537 NP_001020538 NP_001020539
SWISS-PROT P15691 P15692 P26617 P49151 Q9GKR0

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks