BMRB Entry 5235

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5235

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Resonance assignment and secondary structure determination of a C-terminal fragment of the Lupus Autoantigen (La) protein containing a putative RNA recognition motif (RRM)

Deposition date:

2001-12-17

Original release date:

2002-08-22

Authors:

Jacks, Amanda; Kelly, Geoff; Curry, Stephen; Conte, Maria

Citation:

Citation: Jacks, Amanda; Kelly, Geoff; Curry, Stephen; Conte, Maria. "Letter to the Editor: Resonance assignment and secondary structure determination of a C-terminal fragment of the Lupus Autoantigen (La) protein containing a putative RNA recognition motif (RRM)" J. Biomol. NMR 22, 387-388 (2002).
PubMed: 12018493

Assembly members:

Assembly members:
Lupus autoantigen protein, polymer, 121 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Lupus autoantigen protein: MRSGHHHHHHGSLEEKIGCL LKFSGDLDDQTCREDLHILF SNHGEIKWIDFVRGAKEGII LFKEKAKEALGKAKDANNGN LQLRNKEVTWEVLEGEVEKE ALKKIIEDQQESLNKWKSKG R

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	747
13C chemical shifts	453
15N chemical shifts	111

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	La C-terminal(225-334)	1

Entities:

Entity 1, La C-terminal(225-334) 121 residues - Formula weight is not available

1

MET

ARG

SER

GLY

HIS

2

GLY

SER

LEU

GLU

LYS

ILE

GLY

CYS

LEU

3

LEU

LYS

PHE

SER

GLY

ASP

LEU

ASP

GLN

4

THR

CYS

ARG

GLU

ASP

LEU

HIS

ILE

LEU

PHE

5

SER

ASN

HIS

GLY

GLU

ILE

LYS

TRP

ILE

ASP

6

PHE

VAL

ARG

GLY

ALA

LYS

GLU

GLY

ILE

7

LEU

PHE

LYS

GLU

LYS

ALA

LYS

GLU

ALA

LEU

8

GLY

LYS

ALA

LYS

ASP

ALA

ASN

GLY

ASN

9

LEU

GLN

LEU

ARG

ASN

LYS

GLU

VAL

THR

TRP

10

GLU

VAL

LEU

GLU

GLY

GLU

VAL

GLU

LYS

GLU

11

ALA

LEU

LYS

ILE

GLU

ASP

GLN

12

GLU

SER

LEU

ASN

LYS

TRP

LYS

SER

LYS

GLY

13

ARG

Samples:

sample_1: Lupus autoantigen protein, [U-95% 13C; U-93% 15N], 1.0 mM

Ex-cond_1: pH: 7.0; temperature: 300 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

NMR spectrometers:

Varian INOVA 600 MHz
Varian INOVA 800 MHz

BMRB	17878
PDB	1OWX
DBJ	BAE87871 BAE87890 BAG70042 BAG70165 BAI45822
EMBL	CAA31985 CAA32815
GB	AAA36577 AAA51885 AAH01289 AAH20818 AAP88864
REF	NP_001267347 NP_001270975 NP_001281074 NP_003133 XP_001497943
SP	P05455
AlphaFold	P05455