BMRB Entry 52049

Title:
An analysis of nucleotide-amyloid interactions reveals selective binding to codon-sized RNA
Deposition date:
2023-07-20
Original release date:
2023-10-03
Authors:
Rout, Saroj; Cadalbert, Riccardo; Schroeder, Nina; Wang, Julia; Zehnder, Johannes; Gampp, Olivia; Wiegand, Thomas; Guntert, Peter; Klingler, David; Kreutz, Christoph; Knoerlein, Anna; Hall, Jonathan; Greenwald, Jason; Riek, Roland
Citation:

Citation: Rout, Saroj; Cadalbert, Riccardo; Schroeder, Nina; Wang, Julia; Zehnder, Johannes; Gampp, Olivia; Wiegand, Thomas; Guntert, Peter; Klingler, David; Kreutz, Christoph; Knoerlein, Anna; Hall, Jonathan; Greenwald, Jason; Riek, Roland. "An Analysis of Nucleotide-Amyloid Interactions Reveals Selective Binding to Codon-Sized RNA"  J. Am. Chem. Soc. 145, 21915-21924 (2023).
PubMed: 37782045

Assembly members:

Assembly members:
entity_1, polymer, 8 residues, Formula weight is not available
entity_2, polymer, 4 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: VAQAQINI
entity_2: GUCA

Data sets:
Data typeCount
13C chemical shifts39

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1VAQAQINI1
2GUCA2

Entities:

Entity 1, VAQAQINI 8 residues - Formula weight is not available

1   VALALAGLNALAGLNILEASNILE

Entity 2, GUCA 4 residues - Formula weight is not available

1   GUCA

Samples:

sample_1: VAQAQINI, [U-100% 13C; U-100% 15N], 10 mg; GUCA, [U-10% 13C], 1.5 mg

sample_conditions_1: pH: 3; pressure: 1 atm; temperature: 283 K

Experiments:

NameSampleSample stateSample conditions
2D 13C-13C DARRsample_1isotropicsample_conditions_1

Software:

CYANA - chemical shift assignment, structure solution

NMR spectrometers:

  • Bruker AVANCE III 850 MHz