BMRB Entry 51964

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR51964

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Title:
fl SOX2
Deposition date:
2023-05-16
Original release date:
2024-02-17
Authors:
Bjarnasson, Sveinn; Prestel, Andreas; Heidarsson, Petur
Citation:

Citation: Bjarnason, Sveinn; McIvor, Jordan; Prestel, Andreas; Demeny, Kinga; Bullerjahn, Jakob; Kragelund, Birthe; Mercadante, Davide; Heidarsson, Petur. "DNA binding redistributes activation domain ensemble and accessibility in pioneer factor Sox2"  Nat. Commun. 15, 1445-1445 (2024).
PubMed: 38365983

Assembly members:

Assembly members:
entity_1, polymer, 317 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pet24b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: MYNMMETELKPPGPQQTSGG GGGNSTAAAAGGNQKNSPDR VKRPMNAFMVWSRGQRRKMA QENPKMHNSEISKRLGAEWK LLSETEKRPFIDEAKRLRAL HMKEHPDYKYRPRRKTKTLM KKDKYTLPGGLLAPGGNSMA SGVGVGAGLGAGVNQRMDSY AHMNGWSNGSYSMMQDQLGY PQHPGLNAHGAAQMQPMHRY DVSALQYNSMTSSQTYMNGS PTYSMSYSQQGTPGMALGSM GSVVKSEASSSPPVVTSSSH SRAPCQAGDLRDMISMYLPG AEVPEPAAPSRLHMSQHYQS GPVPGTAINGTLPLSHM

Data sets:
Data typeCount
13C chemical shifts425
15N chemical shifts285
1H chemical shifts285
T1 relaxation values214
T2 relaxation values214
heteronuclear NOE values214

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1fl SOX21

Entities:

Entity 1, fl SOX2 317 residues - Formula weight is not available

1   METTYRASNMETMETGLUTHRGLULEULYS
2   PROPROGLYPROGLNGLNTHRSERGLYGLY
3   GLYGLYGLYASNSERTHRALAALAALAALA
4   GLYGLYASNGLNLYSASNSERPROASPARG
5   VALLYSARGPROMETASNALAPHEMETVAL
6   TRPSERARGGLYGLNARGARGLYSMETALA
7   GLNGLUASNPROLYSMETHISASNSERGLU
8   ILESERLYSARGLEUGLYALAGLUTRPLYS
9   LEULEUSERGLUTHRGLULYSARGPROPHE
10   ILEASPGLUALALYSARGLEUARGALALEU
11   HISMETLYSGLUHISPROASPTYRLYSTYR
12   ARGPROARGARGLYSTHRLYSTHRLEUMET
13   LYSLYSASPLYSTYRTHRLEUPROGLYGLY
14   LEULEUALAPROGLYGLYASNSERMETALA
15   SERGLYVALGLYVALGLYALAGLYLEUGLY
16   ALAGLYVALASNGLNARGMETASPSERTYR
17   ALAHISMETASNGLYTRPSERASNGLYSER
18   TYRSERMETMETGLNASPGLNLEUGLYTYR
19   PROGLNHISPROGLYLEUASNALAHISGLY
20   ALAALAGLNMETGLNPROMETHISARGTYR
21   ASPVALSERALALEUGLNTYRASNSERMET
22   THRSERSERGLNTHRTYRMETASNGLYSER
23   PROTHRTYRSERMETSERTYRSERGLNGLN
24   GLYTHRPROGLYMETALALEUGLYSERMET
25   GLYSERVALVALLYSSERGLUALASERSER
26   SERPROPROVALVALTHRSERSERSERHIS
27   SERARGALAPROCYSGLNALAGLYASPLEU
28   ARGASPMETILESERMETTYRLEUPROGLY
29   ALAGLUVALPROGLUPROALAALAPROSER
30   ARGLEUHISMETSERGLNHISTYRGLNSER
31   GLYPROVALPROGLYTHRALAILEASNGLY
32   THRLEUPROLEUSERHISMET

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