BMRB Entry 51941

Name: 1H and 13C NMR assignments for C-terminal panusin
Published: 2023-06-29

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR51941

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

1H and 13C NMR assignments for C-terminal panusin

Deposition date:

2023-04-26

Original release date:

2023-06-29

Authors:

Jimenez, M. Angeles; Andreu, David; Bello-Madruga, Roberto

Citation:

Citation: Bello-Madruga, Roberto; Valle, Javier; Jimenez, M. Angeles; Torrent, Marc; Montero-Alejo, Vivian; Andreu, David. "The C-Terminus of Panusin, a Lobster b-Defensin, Is Crucial for Optimal Antimicrobial Activity and Serum Stability" Pharmaceutics 15, 1777-1777 (2023).
PubMed: 37376223

Assembly members:

Assembly members:
entity_1, polymer, 24 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Caribbean spiny lobster Taxonomy ID: 6737 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Panulirus argus

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: YCPYGNRLNYFCPLGRTCCR RSYX

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	82
1H chemical shifts	155

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Ct-PaD	1

Entities:

Entity 1, Ct-PaD 24 residues - Formula weight is not available

X is the C-terminal amide group Sequence corresponds to the 23 C-terminal residues of panusin from lobster

1

TYR

CYS

PRO

TYR

GLY

ASN

ARG

LEU

ASN

TYR

2

PHE

CYS

PRO

LEU

GLY

ARG

THR

CYS

ARG

3

ARG

SER

TYR

NH2

Samples:

sample_1: Ct-PaD 1 mM; H2O 90%; D2O, [U-100% 2H], 10%; DSS 0.1 mM

sample_conditions_1: pH: 5.5; pressure: 1 atm; temperature: 298.17 K

Experiments:

Name	Sample	Sample state	Sample conditions
1D 1H	sample_1	isotropic	sample_conditions_1
2D DQF-COSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC aliphatic	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC aromatic	sample_1	isotropic	sample_conditions_1

Software:

TOPSPIN - collection, processing

NMRFAM-SPARKY - chemical shift assignment

NMR spectrometers:

Bruker AVANCE NEO 600 MHz