BMRB Entry 51747

Title:
Backbone Assignment of the S519N variant of SASH1 Pigmentation Associated Disordered Region (SPIDER)
Deposition date:
2022-12-19
Original release date:
2023-04-21
Authors:
Clements, Christopher; Shellman, Yiqun; Vogeli, Beat; Henen, Morkos
Citation:

Citation: Clements, Christopher; Shellman, Yiqun; Vogeli, Beat; Henen, Morkos. "Solution NMR backbone assignment of the SASH1 SLy proteins associated disordered region (SPIDER)"  Biomol. NMR Assign. 17, 151-157 (2023).
PubMed: 37155029

Assembly members:

Assembly members:
entity_1, polymer, 169 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: Pet28 a (+)

Data sets:
Data typeCount
13C chemical shifts460
15N chemical shifts153
1H chemical shifts153

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1SPIDER-SASH11

Entities:

Entity 1, SPIDER-SASH1 169 residues - Formula weight is not available

SASH1 396-564 (Linker: 396-400, SPIDER: 401-553 & SH3: 554-564)

1   GLYLEUGLYSERLEUSERHISGLYARGTHR
2   CYSSERPHEGLYGLYPHEASPLEUTHRASN
3   ARGSERLEUHISVALGLYSERASNASNSER
4   ASPPROMETGLYLYSGLUGLYASPPHEVAL
5   TYRLYSGLUVALILELYSSERPROTHRALA
6   SERARGILESERLEUGLYLYSLYSVALLYS
7   SERVALLYSGLUTHRMETARGLYSARGMET
8   SERLYSLYSTYRSERSERSERVALSERGLU
9   GLNASPSERGLYLEUASPGLYMETPROGLY
10   SERPROPROPROSERGLNPROASPPROGLU
11   HISLEUASPLYSPROLYSLEULYSALAGLY
12   GLYSERVALGLUSERLEUARGSERSERLEU
13   SERGLYGLNASNSERMETSERGLYGLNTHR
14   VALSERTHRTHRASPSERSERTHRSERASN
15   ARGGLUSERVALLYSSERGLUASPGLYASP
16   ASPGLUGLUPROPROTYRARGGLYPROPHE
17   CYSGLYARGALAARGVALHISTHRASP

Samples:

sample_1: SPIDER-SASH1, [U-100% 13C; U-100% 15N; U-80% 2H], 802 uM; NaCl 100 mM

sample_conditions_1: ionic strength: 100 mM; pH: 7; pressure: 1 atm; temperature: 278 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
3D TROSY HNCACBsample_1isotropicsample_conditions_1
3D TROSY HNCACOsample_1isotropicsample_conditions_1
3D TROSY HN(CO)CACBsample_1isotropicsample_conditions_1
3D TROSY HNCOsample_1isotropicsample_conditions_1
3D HNNsample_1isotropicsample_conditions_1

Software:

CcpNMR v2.5.1 - chemical shift assignment, data analysis

TOPSPIN v4.1.4 - collection, data analysis

NMRFAM-SPARKY v1.470 - data analysis

NMRPipe - data analysis, processing

NMR spectrometers:

  • Bruker AVANCE NEO 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks