BMRB Entry 51745

Name: AbpSH3 100 mM NaCl
Published: 2023-05-24

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR51745

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

AbpSH3 100 mM NaCl

Deposition date:

2022-12-16

Original release date:

2023-05-24

Authors:

Jaramillo-Martinez, Valeria; Dominguez, Matthew; Stollar, Elliott

Citation:

Citation: Jaramillo-Martinez, Valeria; Dominguez, Matthew; Bell, Gemma; Souness, Megan; Carhart, Anna; Cuibus, M Adriana; Masoumzadeh, Elahe; Lantz, Benjamin; Adkins, Aaron; Latham, Michael; Ball, K Aurelia; Stollar, Elliott. "How a highly acidic SH3 domain folds in the absence of its charged peptide target" Protein Sci. 32, e4635-e4635 (2023).
PubMed: 36992534

Assembly members:

Assembly members:
entity_1, polymer, 72 residues, Formula weight is not available

Natural source:

Natural source: Common Name: baker's yeast Taxonomy ID: 4932 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET32b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: MAPKENPWATAEYDYDAAED NELTFVENDKIINIEFVDDD WWLGELEKDGSKGLFPSNYV SLGNLEHHHHHH

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
15N chemical shifts	68
1H chemical shifts	68

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	AbpSH3	1

Entities:

Entity 1, AbpSH3 72 residues - Formula weight is not available

1

MET

ALA

PRO

LYS

GLU

ASN

PRO

TRP

ALA

THR

2

ALA

GLU

TYR

ASP

TYR

ASP

ALA

GLU

ASP

3

ASN

GLU

LEU

THR

PHE

VAL

GLU

ASN

ASP

LYS

4

ILE

ASN

ILE

GLU

PHE

VAL

ASP

5

TRP

LEU

GLY

GLU

LEU

GLU

LYS

ASP

GLY

6

SER

LYS

GLY

LEU

PHE

PRO

SER

ASN

TYR

VAL

7

SER

LEU

GLY

ASN

LEU

GLU

HIS

8

HIS

Samples:

sample_1: AbpSH3 (531-591), [U-15N], 1.1 mM; TRIS 10 mM; sodium azide 0.05%; D2O 10%; sodium chloride 100 mM

sample_conditions_1: ionic strength: 0.1 M; pH: 8.1; pressure: 1 atm; temperature: 293.15 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1

Software:

NMRPipe - data analysis

CcpNMR - chemical shift assignment

VNMRj v4.2 - collection

NMR spectrometers:

Agilent AM 600 MHz

UNP	P15891
AlphaFold	D6VR88