BMRB Entry 51517

Name: hnRNP A18
Published: 2023-06-30

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR51517

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

hnRNP A18

Deposition date:

2022-07-18

Original release date:

2023-06-30

Authors:

Coburn, Katherine; Roth, Braden; Weber, David J.; Varney, Kristen

Citation:

Citation: Coburn, Katherine; Roth, Braden; Varney, Kristen; Carrier, France; Weber, David. "1H, 13C, and 15N assignments of the mRNA binding protein hnRNP A18" Biomol. NMR Assign. 17, 37-41 (2023).
PubMed: 36539586

Assembly members:

Assembly members:
entity_1, polymer, 172 residues, 18653.9768 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET 21a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: MASDEGKLFVGGLSFDTNEQ SLEQVFSKYGQISEVVVVKD RETQRSRGFGFVTFENIDDA KDAMMAMNGKSVDGRQIRVD QAGKSSDNRSRGYRGGSAGG RGFFRGGRGRGRGFSRGGGD RGYGGNRFESRSGGYGGSRD YYSSRSQSGGYSDRSSGGSY RDSYDSYATHNE

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	472
15N chemical shifts	159
1H chemical shifts	548

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	A18	1

Entities:

Entity 1, A18 172 residues - 18653.9768 Da.

1

MET

ALA

SER

ASP

GLU

GLY

LYS

LEU

PHE

VAL

2

GLY

LEU

SER

PHE

ASP

THR

ASN

GLU

GLN

3

SER

LEU

GLU

GLN

VAL

PHE

SER

LYS

TYR

GLY

4

GLN

ILE

SER

GLU

VAL

LYS

ASP

5

ARG

GLU

THR

GLN

ARG

SER

ARG

GLY

PHE

GLY

6

PHE

VAL

THR

PHE

GLU

ASN

ILE

ASP

ALA

7

LYS

ASP

ALA

MET

ALA

MET

ASN

GLY

LYS

8

SER

VAL

ASP

GLY

ARG

GLN

ILE

ARG

VAL

ASP

9

GLN

ALA

GLY

LYS

SER

ASP

ASN

ARG

SER

10

ARG

GLY

TYR

ARG

GLY

SER

ALA

GLY

11

ARG

GLY

PHE

ARG

GLY

ARG

GLY

ARG

12

GLY

ARG

GLY

PHE

SER

ARG

GLY

ASP

13

ARG

GLY

TYR

GLY

ASN

ARG

PHE

GLU

SER

14

ARG

SER

GLY

TYR

GLY

SER

ARG

ASP

15

TYR

SER

ARG

SER

GLN

SER

GLY

16

TYR

SER

ASP

ARG

SER

GLY

SER

TYR

17

ARG

ASP

SER

TYR

ASP

SER

TYR

ALA

THR

HIS

18

ASN

GLU

Samples:

sample_1: A18, [U-13C; U-15N], 1.0 mM; acetic acid 50 mM

sample_conditions_1: pH: 5.200; temperature: 298.000 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC/HMQC	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
CBCACONH (H[N[co[{CA\|ca[C]}]]])	sample_1	isotropic	sample_conditions_1
3D HN(CO)CA	sample_1	isotropic	sample_conditions_1
HNCACO (H[N[ca[CO]]])	sample_1	isotropic	sample_conditions_1
4D_noesy_nc (H[N]_H[C].through-space)	sample_1	isotropic	sample_conditions_1

Software:

CcpNmr Analysis v2.4 - Assignment

NMR spectrometers:

Bruker Avance 600 MHz