BMRB Entry 51311

Title:
Assigned backbone amide and methyl chemical shifts for human Sox2 HMG domain
Deposition date:
2022-02-07
Original release date:
2023-03-20
Authors:
Malaga Gadea, Fabiana; Nikolova, Evgenia
Citation:

Citation: Malaga Gadea, Fabiana; Nikolova, Evgenia. "Structural Plasticity of Pioneer Factor Sox2 and DNA Bendability Modulate Nucleosome Engagement and Sox2-Oct4 Synergism"  J. Mol. Biol. 435, 167916-167916 (2023).
PubMed: 36495920

Assembly members:

Assembly members:
entity_1, polymer, 82 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET15

Entity Sequences (FASTA):

Data sets:
Data typeCount
13C chemical shifts27
15N chemical shifts59
1H chemical shifts140

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Sox2 HMG1

Entities:

Entity 1, Sox2 HMG 82 residues - Formula weight is not available

1   GLYPROASPARGVALLYSARGPROMETASN
2   ALAPHEMETVALTRPSERARGGLYGLNARG
3   ARGLYSMETALAGLNGLUASNPROLYSMET
4   HISASNSERGLUILESERLYSARGLEUGLY
5   ALAGLUTRPLYSLEULEUSERGLUTHRGLU
6   LYSARGPROPHEILEASPGLUALALYSARG
7   LEUARGALALEUHISMETLYSGLUHISPRO
8   ASPTYRLYSTYRARGPROARGARGLYSTHR
9   LYSTHR

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks