BMRB Entry 51182

Name: Human Amylin HNa and HNz PEGylated (Bis-PEGylated)
Published: 2021-12-01

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR51182

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Human Amylin HNa and HNz PEGylated (Bis-PEGylated)

Deposition date:

2021-11-16

Original release date:

2021-12-01

Authors:

de Araujo, Talita; Lima, Luis Mauricio; Almeida, Marcius

Citation:

Citation: Lima, Luis Mauricio; de Araujo, Talita; Almeida, Marcius. "Unambiguous characterization of PEGylation site on human amylin by 2D NMR" Peptide Science ., .-..

Assembly members:

Assembly members:
entity_1, polymer, 37 residues, Formula weight is not available
entity_PEG, non-polymer, 106.120 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: KCNTATCATQRLANFLVHSS NNFGAILSSTNVGSNTY

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	99
1H chemical shifts	229

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Human Amylin	1
2	polyethylene glycol	2

Entities:

Entity 1, Human Amylin 37 residues - Formula weight is not available

1

LYS

CYS

ASN

THR

ALA

THR

CYS

ALA

THR

GLN

2

ARG

LEU

ALA

ASN

PHE

LEU

VAL

HIS

SER

3

ASN

PHE

GLY

ALA

ILE

LEU

SER

THR

4

ASN

VAL

GLY

SER

ASN

THR

TYR

Entity 2, polyethylene glycol - C4 H10 O3 - 106.120 Da.

1

PEG

Samples:

sample_1: Human amylin 0.5 mM; sodium acetate 10 mM

sample_conditions_1: pH: 4.5; temperature: 285 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1

Software:

TOPSPIN vv4.0.6 - collection, data analysis, processing

CARA vv1.9.1.5 - chemical shift assignment, data analysis

NMR spectrometers:

Bruker Ascend 500 MHz