BMRB Entry 50950

Name: MoPrP(89-230)_G4
Published: 2021-09-16

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR50950

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

MoPrP(89-230)_G4

Deposition date:

2021-05-20

Original release date:

2021-09-16

Authors:

Fridmanis, Jekabs; Jaudzems, Kristaps

Citation:

Citation: Fridmanis, Jekabs; Toleikis, Zigmantas; Sneideris, Tomas; Ziaunys, Mantas; Bobrovs, Raitis; Smirnovas, Vytautas; Jaudzems, Kristaps. "Aggregation Condition-Structure Relationship of Mouse Prion Protein Fibrils" Int. J. Mol. Sci. 22, 9635-9635 (2021).
PubMed: 34502545

Assembly members:

Assembly members:
entity_1, polymer, 144 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pRSETB

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: GSGQGGGTHNQWNKPSKPKT NLKHVAGAAAAGAVVGGLGG YMLGSAMSRPMIHFGNDWED RYYRENMYRYPNQVYYRPVD QYSNQNNFVHDCVNITIKQH TVTTTTKGENFTETDVKMME RVVEQMCVTQYQKESQAYYD GRRS

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	194
15N chemical shifts	49

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	MoPrP(89-230)	1

Entities:

Entity 1, MoPrP(89-230) 144 residues - Formula weight is not available

1

GLY

SER

GLY

GLN

GLY

THR

HIS

ASN

2

GLN

TRP

ASN

LYS

PRO

SER

LYS

PRO

LYS

THR

3

ASN

LEU

LYS

HIS

VAL

ALA

GLY

ALA

4

ALA

GLY

ALA

VAL

GLY

LEU

GLY

5

TYR

MET

LEU

GLY

SER

ALA

MET

SER

ARG

PRO

6

MET

ILE

HIS

PHE

GLY

ASN

ASP

TRP

GLU

ASP

7

ARG

TYR

ARG

GLU

ASN

MET

TYR

ARG

TYR

8

PRO

ASN

GLN

VAL

TYR

ARG

PRO

VAL

ASP

9

GLN

TYR

SER

ASN

GLN

ASN

PHE

VAL

HIS

10

ASP

CYS

VAL

ASN

ILE

THR

ILE

LYS

GLN

HIS

11

THR

VAL

THR

LYS

GLY

GLU

ASN

12

PHE

THR

GLU

THR

ASP

VAL

LYS

MET

GLU

13

ARG

VAL

GLU

GLN

MET

CYS

VAL

THR

GLN

14

TYR

GLN

LYS

GLU

SER

GLN

ALA

TYR

ASP

15

GLY

ARG

SER

Samples:

sample_1: MoPrP(89-230), [U-100% 13C; U-100% 15N], 20 ± 5 mg; Guanidinium chloride 4 ± 0.005 M; sodium phosphate 50 ± 0.1 mM

sample_conditions_1: pH: 6; pressure: 1 atm; temperature: 273 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D NCACX	sample_1	isotropic	sample_conditions_1
3D NCOCX	sample_1	isotropic	sample_conditions_1
CANCO	sample_1	isotropic	sample_conditions_1
CONCA	sample_1	isotropic	sample_conditions_1
DARR	sample_1	isotropic	sample_conditions_1
2D ChhC	sample_1	isotropic	sample_conditions_1
2D NhhC	sample_1	isotropic	sample_conditions_1
2D 13C-detected NCA	sample_1	isotropic	sample_conditions_1
2D 13C-detected NCO	sample_1	isotropic	sample_conditions_1

Software:

CARA v1.9.2 - assignment

TOPSPIN v4.1.1 - Spectra acquisition

NMR spectrometers:

Bruker AVANCE III 800 MHz