BMRB Entry 5078

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PDB ID: 1k8m
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5078
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Structure and Backbone Dynamics of a Lipoyl Domain from Human Mitochondrial Branched-Chain alpha-Ketoacid Dehydrogenase

Deposition date:

2001-07-12

Original release date:

2004-02-19

Authors:

Chang, Chi-Fon; Chou, Hui-Ting; Chuang, Jacinta; Chuang, David; Huang, Tai-huang

Citation:

Citation: Chang, Chi-Fon; Chou, Hui-Ting; Chuang, Jacinta; Chuang, David; Huang, Tai-huang. "Solution Structure and Dynamics of the Lipoic Acid-bearing Domain of Human Mitochondrial Branched-chain Alpha-Keto Acid Dehydrogenase" J. Biol. Chem. 277, 15865-15873 (2002).
PubMed: 11839747

Assembly members:

Assembly members:
Lipoyl acide bearing domain, polymer, 93 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Lipoyl acide bearing domain: MGQVVQFKLSDIGEGIREVT VKEWYVKEGDTVSQFDSICE VQSDKASVTITSRYDGVIKK LYYNLDDIAYVGKPLVDIET EALKDLEHHHHHH

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	540
13C chemical shifts	345
15N chemical shifts	85

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	LBD of human BCKD	1

Entities:

Entity 1, LBD of human BCKD 93 residues - Formula weight is not available

1

MET

GLY

GLN

VAL

GLN

PHE

LYS

LEU

SER

2

ASP

ILE

GLY

GLU

GLY

ILE

ARG

GLU

VAL

THR

3

VAL

LYS

GLU

TRP

TYR

VAL

LYS

GLU

GLY

ASP

4

THR

VAL

SER

GLN

PHE

ASP

SER

ILE

CYS

GLU

5

VAL

GLN

SER

ASP

LYS

ALA

SER

VAL

THR

ILE

6

THR

SER

ARG

TYR

ASP

GLY

VAL

ILE

LYS

7

LEU

TYR

ASN

LEU

ASP

ILE

ALA

TYR

8

VAL

GLY

LYS

PRO

LEU

VAL

ASP

ILE

GLU

THR

9

GLU

ALA

LEU

LYS

ASP

LEU

GLU

HIS

10

HIS

Samples:

sample_1: Lipoyl acide bearing domain, [U-13C; U-15N], 2 – 3 mM

cond_1: pH: 7.5; temperature: 310 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H-15N NOESY	not available	not available	not available
1H-15N TOCSY	not available	not available	not available
HNCA	not available	not available	not available
HN(CO)CA	not available	not available	not available
HNCO	not available	not available	not available
HN(CA)CO	not available	not available	not available
CBCANH	not available	not available	not available
CBCA(CO)NH	not available	not available	not available

Software:

No software information available

NMR spectrometers:

Bruker Avance 600 MHz

PDB	1K8M 1K8O
GB	AAA59200 KFO26886
REF	XP_004385775 XP_005339742 XP_005542667 XP_007123933 XP_007123934