BMRB Entry 50691

Name: Chemical shift assignment of thorarchaeota profilings
Published: 2021-07-07

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PDB ID: 7pbh
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR50691
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Chemical shift assignment of thorarchaeota profilings

Deposition date:

2021-01-05

Original release date:

2021-07-07

Authors:

Chi, Celestine

Citation:

Citation: Inturi, Raviteja; Lara, Sandra; Derweesh, Mahmoud; Chi, Celestine. "Structural Characterization of a Thorarchaeota Profilin Indicates Eukaryotic-Like Features but with an Extended N-Terminus" Adv. Biol. (Weinh) 6, e2101323-e2101323 (2022).
PubMed: 35429148

Assembly members:

Assembly members:
entity_1, polymer, 145 residues, Formula weight is not available

Natural source:

Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET28a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: GMAGYNLGTEWISLRSKLEM SDPVMEAYTQAYEASNQMVQ AFGVIKADGSVLWQSNNWDL SADAQQLISAVNNQSASVKQ NDVKYSTIRTSPESLVARNV QGNGTLILARIEDDKWVVAW ASADAAPDSVYVDIDRAAKA LKGKI

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1
spectral_peak_list
- spectral_peak_list_1
- spectral_peak_list_2

Data type	Count
13C chemical shifts	261
15N chemical shifts	136
1H chemical shifts	808

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Thorarchaeota profilin	1

Entities:

Entity 1, Thorarchaeota profilin 145 residues - Formula weight is not available

1

GLY

MET

ALA

GLY

TYR

ASN

LEU

GLY

THR

GLU

2

TRP

ILE

SER

LEU

ARG

SER

LYS

LEU

GLU

MET

3

SER

ASP

PRO

VAL

MET

GLU

ALA

TYR

THR

GLN

4

ALA

TYR

GLU

ALA

SER

ASN

GLN

MET

VAL

GLN

5

ALA

PHE

GLY

VAL

ILE

LYS

ALA

ASP

GLY

SER

6

VAL

LEU

TRP

GLN

SER

ASN

TRP

ASP

LEU

7

SER

ALA

ASP

ALA

GLN

LEU

ILE

SER

ALA

8

VAL

ASN

GLN

SER

ALA

SER

VAL

LYS

GLN

9

ASN

ASP

VAL

LYS

TYR

SER

THR

ILE

ARG

THR

10

SER

PRO

GLU

SER

LEU

VAL

ALA

ARG

ASN

VAL

11

GLN

GLY

ASN

GLY

THR

LEU

ILE

LEU

ALA

ARG

12

ILE

GLU

ASP

LYS

TRP

VAL

ALA

TRP

13

ALA

SER

ALA

ASP

ALA

PRO

ASP

SER

VAL

14

TYR

VAL

ASP

ILE

ASP

ARG

ALA

LYS

ALA

15

LEU

LYS

GLY

LYS

ILE

Samples:

sample_1: Thorarchaeota profilin, [U-100% 13C; U-100% 15N], 0.5 mM

sample_conditions_1: ionic strength: 0.1 M; pH: 6.5; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1

Software:

CcpNmr Analysis v2.14 - chemical shift assignment

NMR spectrometers:

Bruker AVANCE NEO 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks