BMRB Entry 50606

Name: NMR chemical shifts of Ly29-43C-C peptide
Published: 2021-05-28

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR50606

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

NMR chemical shifts of Ly29-43C-C peptide

Deposition date:

2020-12-01

Original release date:

2021-05-28

Authors:

Mineev, Konstantin; Utkin, Yuri

Citation:

Citation: Mineev, Konstantin; Kryukova, Elena; Kasheverov, Igor; Egorova, Natalia; Zhmak, Maxim; Ivanov, Igor; Senko, Dmitry; Feofanov, Alexey; Ignatova, Anastasia; Arseniev, Alexander; Utkin, Yuri; Tsetlin, Victor. "Spatial Structure and Activity of Synthetic Fragments of Lynx1 and of Nicotinic Receptor Loop C Models." Biomolecules 11, 1-1 (2020).
PubMed: 33374963

Assembly members:

Assembly members:
entity_1, polymer, 17 residues, Formula weight is not available

Natural source:

Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: CTTRTYYTPTRMKVSKC

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	82
15N chemical shifts	16
1H chemical shifts	119

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Ly29,43	1

Entities:

Entity 1, Ly29,43 17 residues - Formula weight is not available

1

CYS

THR

ARG

THR

TYR

THR

PRO

THR

2

ARG

MET

LYS

VAL

SER

LYS

CYS

Samples:

sample_1: Ly29,43 C-C 40 ± 1 mg/mL; potassium phosphate 50 ± 1 mM

sample_conditions_1: ionic strength: 50 mM; pH: 5.5; pressure: 1 atm; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HMBC	sample_1	isotropic	sample_conditions_1
2D 1H-15N HMBC	sample_1	isotropic	sample_conditions_1

Software:

CARA v1.9 - chemical shift assignment

NMR spectrometers:

Bruker Avance 700 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks