BMRB Entry 50469

Name: A28
Published: 2021-04-13

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR50469

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

A28

Deposition date:

2020-09-14

Original release date:

2021-04-13

Authors:

Wu, Danni

Citation:

Citation: Wu, Danni; Lou, Yuan-Chao; Chang, Wen; Tzou, Der-Lii. "NMR assignments of vaccinia virus protein A28: an entry-fusion complex component" Biomol. NMR Assignments 15, 117-120 (2021).
PubMed: 33398629

Assembly members:

Assembly members:
entity_1, polymer, 109 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Vaccinia virus Taxonomy ID: 10245 Superkingdom: Viruses Kingdom: not available Genus/species: Orthopoxvirus Vaccinia virus

Experimental source:

Experimental source: Production method: purified from the natural source

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: ATHAAFEYSKSIGGTPALDR RVQDVNDTISDVKQKWRCVV YPGNGFVSASIFGFQAEVGP NNTRSIRKFNTMQQCIDFTF SDVININIYNPCVVPNINNA ECQFLKSVL

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	471
15N chemical shifts	116
1H chemical shifts	732

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	A28	1

Entities:

Entity 1, A28 109 residues - Formula weight is not available

1

ALA

THR

HIS

ALA

PHE

GLU

TYR

SER

LYS

2

SER

ILE

GLY

THR

PRO

ALA

LEU

ASP

ARG

3

ARG

VAL

GLN

ASP

VAL

ASN

ASP

THR

ILE

SER

4

ASP

VAL

LYS

GLN

LYS

TRP

ARG

CYS

VAL

5

TYR

PRO

GLY

ASN

GLY

PHE

VAL

SER

ALA

SER

6

ILE

PHE

GLY

PHE

GLN

ALA

GLU

VAL

GLY

PRO

7

ASN

THR

ARG

SER

ILE

ARG

LYS

PHE

ASN

8

THR

MET

GLN

CYS

ILE

ASP

PHE

THR

PHE

9

SER

ASP

VAL

ILE

ASN

ILE

ASN

ILE

TYR

ASN

10

PRO

CYS

VAL

PRO

ASN

ILE

ASN

ALA

11

GLU

CYS

GLN

PHE

LEU

LYS

SER

VAL

LEU

Samples:

sample_1: A28, [U-100% 13C; U-100% 15N], 1 mM

sample_conditions_1: pH: 6.5; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D CBCANH	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HN(CA)CO	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1
2D HBCBCGCDCEHE	sample_1	isotropic	sample_conditions_1
2D HBCBCGCDHD	sample_1	isotropic	sample_conditions_1

Software:

NMRView - chemical shift assignment, data analysis

NMR spectrometers:

Bruker Avance 850 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks