BMRB Entry 5019

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR5019

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N Chemical Shift Assignments of the N-terminal PAS Domain of mNPAS2

Deposition date:

2001-05-22

Original release date:

2002-04-05

Authors:

Holdeman, Terra; Gardner, Kevin

Citation:

Citation: Holdeman, Terra; Gardner, Kevin. "1H, 13C and 15N Chemical Shift Assignments of the N-terminal PAS Domain of mNPAS2" J. Biomol. NMR 21, 383-384 (2001).
PubMed: 11824759

Assembly members:

Assembly members:
neuronal PAS protein 2, polymer, 167 residues, 18715 Da.

Natural source:

Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
neuronal PAS protein 2: GAMASFLSNEEFTQLMLEAL DGFVIVVTTDGSIIYVSDSI TPLLGHLPADVMDQNLLNFL PEQEHSEVYKILSSHMLVTD SPSPEFLKSDNDLEFYCHLL RGSLNPKEFPTYEYIKFVGN FRSYNNVPSPSCNGFDNTLS RPCHVPLGKDVCFIATVRLA TPQFLKE

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
13C chemical shifts	466
15N chemical shifts	154
1H chemical shifts	244

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	mNPAS2(78-240) monomer	1

Entities:

Entity 1, mNPAS2(78-240) monomer 167 residues - 18715 Da.

1

GLY

ALA

MET

ALA

SER

PHE

LEU

SER

ASN

GLU

2

GLU

PHE

THR

GLN

LEU

MET

LEU

GLU

ALA

LEU

3

ASP

GLY

PHE

VAL

ILE

VAL

THR

ASP

4

GLY

SER

ILE

TYR

VAL

SER

ASP

SER

ILE

5

THR

PRO

LEU

GLY

HIS

LEU

PRO

ALA

ASP

6

VAL

MET

ASP

GLN

ASN

LEU

ASN

PHE

LEU

7

PRO

GLU

GLN

GLU

HIS

SER

GLU

VAL

TYR

LYS

8

ILE

LEU

SER

HIS

MET

LEU

VAL

THR

ASP

9

SER

PRO

SER

PRO

GLU

PHE

LEU

LYS

SER

ASP

10

ASN

ASP

LEU

GLU

PHE

TYR

CYS

HIS

LEU

11

ARG

GLY

SER

LEU

ASN

PRO

LYS

GLU

PHE

PRO

12

THR

TYR

GLU

TYR

ILE

LYS

PHE

VAL

GLY

ASN

13

PHE

ARG

SER

TYR

ASN

VAL

PRO

SER

PRO

14

SER

CYS

ASN

GLY

PHE

ASP

ASN

THR

LEU

SER

15

ARG

PRO

CYS

HIS

VAL

PRO

LEU

GLY

LYS

ASP

16

VAL

CYS

PHE

ILE

ALA

THR

VAL

ARG

LEU

ALA

17

THR

PRO

GLN

PHE

LEU

LYS

GLU

Samples:

sample_1: neuronal PAS protein 2, [U-13C; U-15N], 1.0 mM

sample_2: neuronal PAS protein 2, [U-99% 2H; U-15N], 1.2 mM

condition_1: pH: 7.5; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
HNCACB	not available	not available	not available
CBCA(CO)NH	not available	not available	not available
HNCO	not available	not available	not available
(HCA)CO(CA)NH	not available	not available	not available
HNHA	not available	not available	not available
3D 15N-edited NOESY	not available	not available	not available

Software:

NMRView v4.0 - assignments

NMRPipe v1.8 - data processing

NMR spectrometers:

Varian Inova 500 MHz
Varian Inova 600 MHz

GB	AAB47249 AAI09167 EDL14555
REF	NP_001101684 NP_032745 XP_008765253 XP_008765254 XP_008765255
SP	P97460
AlphaFold	P97460