BMRB Entry 4956

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR4956

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N resonance assignment of YajQ, a protein of unknown structure and function from Escherichia coli

Deposition date:

2001-01-12

Original release date:

2001-07-30

Authors:

Miron, Simona; Borza, Tudor; Saveanu, Cosmin; Gilles, Anne-Marie; Barzu, Octavian; Craescu, Constantin

Citation:

Citation: Miron, Simona; Borza, Tudor; Saveanu, Cosmin; Gilles, Anne-Marie; Barzu, Octavian; Craescu, Constantin. "Letter to the Editor: 1H, 13C and 15N resonance assignment of YajQ, a protein of unknown structure and function from Escherichia coli" J. Biomol. NMR 20, 287-288 (2001).

Assembly members:

Assembly members:
YajQ from E.coli, polymer, 163 residues, Formula weight is not available

Natural source:

Natural source: Common Name: E.coli Taxonomy ID: 562 Superkingdom: Eubacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
YajQ from E.coli: MPSFDIVSEVDLQEARNAVD NASREVESRFDFRNVEASFE LNDASKTIKVLSESDFQVNQ LLDILRAKLLKRGIEGSSLD VPENIVHSGKTWFVEAKLKQ GIESATQKKIVKMIKDSKLK VQAQIQGDEIRVTGKSRDDL QAVMAMVRGGDLGQPFQFKN FRD

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_Yajq

Data type	Count
13C chemical shifts	144
15N chemical shifts	155
1H chemical shifts	771

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	YajQ	1

Entities:

Entity 1, YajQ 163 residues - Formula weight is not available

1

MET

PRO

SER

PHE

ASP

ILE

VAL

SER

GLU

VAL

2

ASP

LEU

GLN

GLU

ALA

ARG

ASN

ALA

VAL

ASP

3

ASN

ALA

SER

ARG

GLU

VAL

GLU

SER

ARG

PHE

4

ASP

PHE

ARG

ASN

VAL

GLU

ALA

SER

PHE

GLU

5

LEU

ASN

ASP

ALA

SER

LYS

THR

ILE

LYS

VAL

6

LEU

SER

GLU

SER

ASP

PHE

GLN

VAL

ASN

GLN

7

LEU

ASP

ILE

LEU

ARG

ALA

LYS

LEU

8

LYS

ARG

GLY

ILE

GLU

GLY

SER

LEU

ASP

9

VAL

PRO

GLU

ASN

ILE

VAL

HIS

SER

GLY

LYS

10

THR

TRP

PHE

VAL

GLU

ALA

LYS

LEU

LYS

GLN

11

GLY

ILE

GLU

SER

ALA

THR

GLN

LYS

ILE

12

VAL

LYS

MET

ILE

LYS

ASP

SER

LYS

LEU

LYS

13

VAL

GLN

ALA

GLN

ILE

GLN

GLY

ASP

GLU

ILE

14

ARG

VAL

THR

GLY

LYS

SER

ARG

ASP

LEU

15

GLN

ALA

VAL

MET

ALA

MET

VAL

ARG

GLY

16

ASP

LEU

GLY

GLN

PRO

PHE

GLN

PHE

LYS

ASN

17

PHE

ARG

ASP

Samples:

sample_one: YajQ from E.coli 1.3 mM; H2O 95%; D2O 5%

sample_two: YajQ from E.coli, [U-15N], 1.1 mM; H2O 95%; D2O 5%

sample_three: YajQ from E.coli, [U-15N; U-13C], 1.0 mM; H2O 95%; D2O 5%

Sample_conditions_one: pH: 6.5; temperature: 308 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

NMR spectrometers:

Varian Unity 500 MHz

DBJ	BAB33903 BAE76206 BAG75972 BAI23797 BAI29268
EMBL	CAP74960 CAQ30895 CAQ90094 CAQ97298 CAR01769
GB	AAB40182 AAC73529 AAG54776 AAN42021 AAN79015
REF	NP_286168 NP_308507 NP_414960 NP_706314 NP_752471
SP	A7ZII0 A7ZX79 B1J023 B1LJH6 B1XFL4
AlphaFold	A7ZII0 A7ZX79 B1J023 B1LJH6 B1XFL4