BMRB Entry 4790

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR4790

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N Resonance Assignments of the SNT PTB Domain in Complex with FGFR1 Peptide

Deposition date:

2000-07-19

Original release date:

2001-08-01

Authors:

Dhalluin, Christophe; Yan, Kelley; Plotnikova, Olga; Zeng, Lei; Goldfarb, Mitchell; Zhou, Ming-Ming

Citation:

Citation: Dhalluin, Christophe; Yan, Kelley; Plotnikova, Olga; Zeng, Lei; Goldfarb, Mitchell; Zhou, Ming-Ming. "1H, 13C and 15N Resonance Assignments of the SNT PTB Domain in Complex with FGFR1 Peptide" J. Biomol. NMR 18, 371-372 (2000).
PubMed: 11200536

Assembly members:

Assembly members:
suc1-associated neurotrophic factor target, polymer, 118 residues, 13000 Da.
FGFR, polymer, 22 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
suc1-associated neurotrophic factor target: TVPDNHRNKFKVINVDDDGN ELGSGIMELTDTELILYTRK RDSVKWHYLCLRRYGYDSNL FSFESGRRCQTGQGIFAFKC ARAEELFNMLQEIMQNNSIN VVEEPVVERNNHQTELEV
FGFR: HSQMAVHKLAKSIPLRRQVT VS

Data sets:

assigned_chemical_shifts
- shift_set_1
- shift_set_2

Data type	Count
1H chemical shifts	841
13C chemical shifts	354
15N chemical shifts	110

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	SNT PTB domain	1
2	FGFR	2

Entities:

Entity 1, SNT PTB domain 118 residues - 13000 Da.

1

THR

VAL

PRO

ASP

ASN

HIS

ARG

ASN

LYS

PHE

2

LYS

VAL

ILE

ASN

VAL

ASP

GLY

ASN

3

GLU

LEU

GLY

SER

GLY

ILE

MET

GLU

LEU

THR

4

ASP

THR

GLU

LEU

ILE

LEU

TYR

THR

ARG

LYS

5

ARG

ASP

SER

VAL

LYS

TRP

HIS

TYR

LEU

CYS

6

LEU

ARG

TYR

GLY

TYR

ASP

SER

ASN

LEU

7

PHE

SER

PHE

GLU

SER

GLY

ARG

CYS

GLN

8

THR

GLY

GLN

GLY

ILE

PHE

ALA

PHE

LYS

CYS

9

ALA

ARG

ALA

GLU

LEU

PHE

ASN

MET

LEU

10

GLN

GLU

ILE

MET

GLN

ASN

SER

ILE

ASN

11

VAL

GLU

PRO

VAL

GLU

ARG

ASN

12

ASN

HIS

GLN

THR

GLU

LEU

GLU

VAL

Entity 2, FGFR 22 residues - Formula weight is not available

1

HIS

SER

GLN

MET

ALA

VAL

HIS

LYS

LEU

ALA

2

LYS

SER

ILE

PRO

LEU

ARG

GLN

VAL

THR

3

VAL

SER

Samples:

sample_1: suc1-associated neurotrophic factor target, [U-99% 13C; U-99% 15N], 0.4 – 0.5 mM; FGFR, [U-99% 13C; U-99% 15N], 0.4 – 0.5 mM

Ex-cond_1: pH: 6.5; temperature: 303 K; ionic strength: 0.1 M

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

NMR spectrometers:

Bruker DRX 500 MHz
Bruker DRX 600 MHz

Related Database Links:

PDB	1XR0 1XR0
DBJ	BAA02059 BAC25899 BAD96438 BAE72950 BAF84443 BAE72950 BAF84443 BAC25899 BAD96438 BAA02059
EMBL	CAA36101 CAA36175 CAA37015 CAA40401 CAA40402 CAA40402 CAA37015 CAA40401 CAA36101 CAA36175
GB	AAA35835 AAA35836 AAA35837 AAA35840 AAA35958
PRF	1908208A 2103285A 1908208A 2103285A
REF	NP_001073377 NP_001073378 NP_001103677 NP_001127472 NP_001167536 NP_056934 NP_001103677 NP_034336 NP_001073377 NP_001073378
SP	P11362 P16092 Q04589
TPG	DAA14429
SWISS-PROT	P16092 Q04589 P11362
GenBank	AAA35840 AAA35958 AAA35836 AAA35837 AAA35835
AlphaFold	P11362 P16092 Q04589

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks