BMRB Entry 4773

Name: Backbone assignments for OspA N-terminal fragment[27-163]
Published: 2001-08-09

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4773

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone assignments for OspA N-terminal fragment[27-163]

Deposition date:

2000-06-30

Original release date:

2001-08-09

Authors:

Huang, Xiaolin; Nakagawa, Tomoko; Tamura, Atsuo; Link, Karl; Koide, Akiko; Koide, Shohei

Citation:

Citation: Huang, Xiaolin; Nakagawa, Tomoko; Tamura, Atsuo; Link, Karl; Koide, Akiko; Koide, Shohei. "Formation of the Single-layer Beta-sheet of Borrelia burgdorferi OspA in the Absence of the C-terminal Capping Globular Domain" J. Mol. Biol. 308, 367-375 (2001).

Assembly members:

Assembly members:
outer surface protein A, polymer, 141 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Spirochete Taxonomy ID: 139 Superkingdom: Eubacteria Kingdom: Bacteria Genus/species: Borrelia burgdorferi

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
outer surface protein A: GSHMKNSVSVDLPGEMKVLV SKEKNKDGKYDLIATVDKLE LKGTSDKNNGSGVLEGVKAD KSKVKLTISDDLGQTTLEVF KEDGKTLVSKKVTSKDKSST EEKFNEKGEVSEKIITRADG TRLEYTGIKSDGSGKAKEVL K

Data sets:

assigned_chemical_shifts
- backbone

Data type	Count
1H chemical shifts	138
13C chemical shifts	406
15N chemical shifts	138

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	OspA fragment residue 27-163	1

Entities:

Entity 1, OspA fragment residue 27-163 141 residues - Formula weight is not available

1

GLY

SER

HIS

MET

LYS

ASN

SER

VAL

SER

VAL

2

ASP

LEU

PRO

GLY

GLU

MET

LYS

VAL

LEU

VAL

3

SER

LYS

GLU

LYS

ASN

LYS

ASP

GLY

LYS

TYR

4

ASP

LEU

ILE

ALA

THR

VAL

ASP

LYS

LEU

GLU

5

LEU

LYS

GLY

THR

SER

ASP

LYS

ASN

GLY

6

SER

GLY

VAL

LEU

GLU

GLY

VAL

LYS

ALA

ASP

7

LYS

SER

LYS

VAL

LYS

LEU

THR

ILE

SER

ASP

8

ASP

LEU

GLY

GLN

THR

LEU

GLU

VAL

PHE

9

LYS

GLU

ASP

GLY

LYS

THR

LEU

VAL

SER

LYS

10

LYS

VAL

THR

SER

LYS

ASP

LYS

SER

THR

11

GLU

LYS

PHE

ASN

GLU

LYS

GLY

GLU

VAL

12

SER

GLU

LYS

ILE

THR

ARG

ALA

ASP

GLY

13

THR

ARG

LEU

GLU

TYR

THR

GLY

ILE

LYS

SER

14

ASP

GLY

SER

GLY

LYS

ALA

LYS

GLU

VAL

LEU

15

LYS

Samples:

sample_1: outer surface protein A, [U-13C; U-15N], 1.5 mM; sodium phosphate 10 mM; sodium chloride 50 mM

set_1: pH: 6.0; temperature: 308 K

Experiments:

Name	Sample	Sample state	Sample conditions
HSQC	sample_1	not available	set_1
HNCO	sample_1	not available	set_1
CBCA(CO)NH	sample_1	not available	set_1
HNCACB	sample_1	not available	set_1

Software:

No software information available

NMR spectrometers:

Varian Inova 600 MHz

BMRB	4076
PDB	1FJ1 1OSP
EMBL	CAA32579 CAA34487 CAA49314 CAA56467 CAA59729
GB	AAA20947 AAA20949 AAA20951 AAA20953 AAA20955
REF	NP_045688 WP_010258120 WP_010890378 WP_012615002 WP_012665570
SP	B7IZU3 C6C2D6 P0CL66
AlphaFold	B7IZU3 C6C2D6 P0CL66