BMRB Entry 4727

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4727

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Another piece of the Ribosome: Solution Structure of S16 and its Location in the 30S Subunit

Deposition date:

2000-04-28

Original release date:

2000-12-07

Authors:

Allard, Peter; Rak, A.; Wimberly, B.; Clemons, W.; Kalinin, A.; Helgstrand, M.; Garber, M.; Ramakrishnan, V.; Hard, T.

Citation:

Citation: Allard, Peter; Rak, A.; Wimberly, B.; Clemons, W.; Kalinin, A.; Helgstrand, M.; Garber, M.; Ramakrishnan, V.; Hard, T.. "Another piece of the Ribosome: Solution Structure of S16 and its Location in the 30S Subunit" Structure Fold. Des. 8, 875-882 (2000).

Assembly members:

Assembly members:
S16, polymer, 88 residues, Formula weight is not available

Natural source:

Natural source: Common Name: not available Taxonomy ID: 274 Superkingdom: Eubacteria Kingdom: not available Genus/species: Thermus thermophilus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET11c

Entity Sequences (FASTA):

Entity Sequences (FASTA):
S16: MVKIRLARFGSKHNPHYRIV VTDARRKRDGKYIEKIGYYD PRKTTPDWLKVDVERARYWL SVGAQPTDTARRLLRQAGVF RQEAREGA

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
13C chemical shifts	269
15N chemical shifts	83
1H chemical shifts	627

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	S16	1

Entities:

Entity 1, S16 88 residues - Formula weight is not available

1

MET

VAL

LYS

ILE

ARG

LEU

ALA

ARG

PHE

GLY

2

SER

LYS

HIS

ASN

PRO

HIS

TYR

ARG

ILE

VAL

3

VAL

THR

ASP

ALA

ARG

LYS

ARG

ASP

GLY

4

LYS

TYR

ILE

GLU

LYS

ILE

GLY

TYR

ASP

5

PRO

ARG

LYS

THR

PRO

ASP

TRP

LEU

LYS

6

VAL

ASP

VAL

GLU

ARG

ALA

ARG

TYR

TRP

LEU

7

SER

VAL

GLY

ALA

GLN

PRO

THR

ASP

THR

ALA

8

ARG

LEU

ARG

GLN

ALA

GLY

VAL

PHE

9

ARG

GLN

GLU

ALA

ARG

GLU

GLY

ALA

Samples:

sample_1: S16 1.5 mM

sample_2: S16, [U-100% 13C; U-90% 15N], 1.5 mM

cond_1: ionic strength: 0.2 M; pH*: 6.0; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
DQF-COSY	not available	not available	not available
TOCSY	not available	not available	not available
NOESY	not available	not available	not available
1H-15N HSQC	not available	not available	not available
1H-15N TOCSY	not available	not available	not available
1H-15N NOESY	not available	not available	not available
HNHA	not available	not available	not available
HNCA	not available	not available	not available
HN(CO)CA	not available	not available	not available
HNCACB	not available	not available	not available
CBCA(CO)NH	not available	not available	not available
H(CCO)NH	not available	not available	not available
C(CO)NH	not available	not available	not available
HCCH-TOCSY	not available	not available	not available
(HB)CB(CGCD)HD	not available	not available	not available
(HB)CB(CGCDCE)HE	not available	not available	not available

Software:

ANSIG v3.3 - assignment

NMR spectrometers:

Varian INOVA 500 MHz
Varian INOVA 600 MHz
Varian INOVA 800 MHz

Related Database Links:

PDB	1EMW 1FJG 1HNW 1HNX 1HNZ 1HR0 1I94 1I95 1I96 1I97 1IBK 1IBL 1IBM 1J5E 1N32 1N33 1N34 1N36 1PNS 1PNX 1VOQ 1VOS 1VOV 1VOX 1VOZ 1VVL 1VVN 1VVP 1VVR 1VVT 1VVV 1VVX 1VVZ 1VX8 1VXI 1VXK 1VXM 1VXP 1VXS 1VY0 1VY2 1XMO 1XMQ 1XNQ 1XNR 1YL4 2B64 2B9M 2B9O 2E5L 2F4V 2HGI 2HGP 2HGR 2HHH 2J00 2J02 2OW8 2QNH 2UU9 2UUA 2UUB 2UUC 2UXB 2UXC 2UXD 2V46 2V48 2VQE 2VQF 2WDG 2WDH 2WDK 2WDM 2WH1 2WH3 2WRI 2WRK 2WRN 2WRQ 2X9R 2X9T 2XFZ 2XG1 2XQD 2XSY 2XUY 2Y0U 2Y0W 2Y0Y 2Y10 2Y12 2Y14 2Y16 2Y18 2ZM6 3D5A 3D5C 3F1E 3F1G 3FIC 3HUW 3HUY 3I8G 3I8H 3I9B 3I9D 3KIQ 3KIS 3KIU 3KIX 3KNH 3KNJ 3KNL 3KNN 3MR8 3MS0 3OGE 3OGY 3OHC 3OHD 3OHY 3OI0 3OI2 3OI4 3OTO 3PYN 3PYQ 3PYS 3PYU 3T1H 3T1Y 3TVF 3TVG 3UXS 3UXT 3UYD 3UYF 3UZ3 3UZ4 3UZ6 3UZ7 3UZG 3UZI 3UZL 3UZM 3V22 3V24 3V26 3V28 3V2C 3V2E 3V6U 3V6V 3ZN7 3ZND 3ZVO 4ABR 4AQY 4B3M 4B3R 4B3S 4B3T 4B8F 4B8H 4BYB 4BYD 4CR1 4DH9 4DHB 4DR1 4DR2 4DR3 4DR4 4DR5 4DR6 4DR7 4DUY 4DUZ 4DV0 4DV1 4DV2 4DV3 4DV4 4DV5 4DV6 4DV7 4EJ9 4EJA 4G5K 4G5M 4G5T 4G5V 4GKJ 4GKK 4JI0 4JI1 4JI2 4JI3 4JI4 4JI5 4JI6 4JI7 4JI8 4JUW 4JV5 4JYA 4K0K 4K0L 4K0P 4KBT 4KBV 4KCY 4KD0 4KD8 4KDA 4KDG 4KDJ 4KFH 4KFK 4KHP 4KVB 4KWZ 4KX1 4L6K 4L6M 4LF4 4LF5 4LF6 4LF7 4LF8 4LF9 4LFA 4LFB 4LFC 4NVU 4NVW 4NVY 4NW0 4NXM 4NXN 4OX9 4QCM 4QCO 4QCQ 4QCS 4QCU 4QCW 4QCY 4QD0 4QJT 4RB5 4RB7 4RB9 4RBB 4RBD 4RBF 4RBH 4RBJ 4W2A 4W2C 4WT8 4YHH
DBJ	BAD70858
GB	AAB50700 AAS81021 AEG33456 AFH38923
REF	WP_011173115 YP_144301
SP	P62238 Q5SJH3
AlphaFold	P62238 Q5SJH3

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks