BMRB Entry 4645

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PDB ID: 1fwo
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR4645
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

A Peptide Derived from the C-Terminal Part of a Plant Cysteine Protease Folds into a Stack of Two Beta-Hairpins, a Scaffold Present in the Emerging Family of Granulin-Like Growth Factors

Deposition date:

2000-09-24

Original release date:

2001-05-15

Authors:

Tolkatchev, D.; Xu, P.; Ni, F.

Citation:

Citation: Tolkatchev, D.; Xu, P.; Ni, F.. "A Peptide Derived from the C-Terminal Part of a Plant Cysteine Protease Folds into a Stack of Two Beta-Hairpins, a Scaffold Present in the Emerging Family of Granulin-Like Growth Factors" J. Pept. Res. 57, 227-233 (2001).
PubMed: 11298924

Assembly members:

Assembly members:
ORYZAIN BETA CHAIN, polymer, 35 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Rice Taxonomy ID: 4530 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Oryza sativa

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ORYZAIN BETA CHAIN: DHVCDDNFSCPAGSTCSSAF GFRNLSLVWGCSPVE

Data sets:

assigned_chemical_shifts
- chemical_shift_set_1

Data type	Count
1H chemical shifts	206

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	ORYZAIN BETA CHAIN	1

Entities:

Entity 1, ORYZAIN BETA CHAIN 35 residues - Formula weight is not available

1

ASP

HIS

VAL

CYS

ASP

ASN

PHE

SER

CYS

2

PRO

ALA

GLY

SER

THR

CYS

SER

ALA

PHE

3

GLY

PHE

ARG

ASN

LEU

SER

LEU

VAL

TRP

GLY

4

CYS

SER

PRO

VAL

GLU

Samples:

sample_1: ORYZAIN BETA CHAIN 0.5 mM; H2O 90%; D2O 10%

sample_2: ORYZAIN BETA CHAIN 0.5 mM; sodium acetate, [U-2H], 20 mM; H2O 90%; D2O 10%

sample_3: ORYZAIN BETA CHAIN 0.5 mM; D2O 100%

sample_cond_1: pH: 2.0; pressure: 1 atm; temperature: 288 K

sample_cond_2: ionic strength: 0.02 M; pH: 5.0; pressure: 1 atm; temperature: 288 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D NOESY	not available	not available	not available

Software:

X-PLOR v3.1 - refinement

UXNMR v2.1 - processing

PRONTO v19990105 - data analysis

NMR spectrometers:

Bruker AVANCE 500 MHz