BMRB Entry 4616

Name: Light-harvesting complex 1 beta subunit from Rhodobacter sphaeroides
Published: 2000-12-04

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PDB ID: 1dx7
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4616
MolProbity Validation Chart

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Light-harvesting complex 1 beta subunit from Rhodobacter sphaeroides

Deposition date:

1999-12-21

Original release date:

2000-12-04

Authors:

Conroy, M.; Westerhuis, W.; Parkes-Loach, P.; Loach, P.; Hunter, C.; Williamson, M.

Citation:

Citation: Conroy, M.; Westerhuis, W.; Parkes-loach, P.; Loach, P.; Hunter, C.; Williamson, M.. "The solution structure of Rhodobacter sphaeroides LH1beta reveals two helical domains separated by a more flexible region: structural consequences for the LH1 complex." J. Mol. Biol. 298, 83-94 (2000).

Assembly members:

Assembly members:
Light-harvesting protein b-875, beta chain, polymer, 48 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Rhodobacter sphaeroides Taxonomy ID: 1063 Superkingdom: Bacteria Kingdom: not available Genus/species: Rhodobacter sphaeroides

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Rhodobacter spaeroides

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Light-harvesting protein b-875, beta chain: ADKSDLGYTGLTDEQAQELH SVYMSGLWLFSAVAIVAHLA VYIWRPWF

Data sets:

assigned_chemical_shifts
- chem_shift_set_1

Data type	Count
1H chemical shifts	341

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	protein b-875	1

Entities:

Entity 1, protein b-875 48 residues - Formula weight is not available

1

ALA

ASP

LYS

SER

ASP

LEU

GLY

TYR

THR

GLY

2

LEU

THR

ASP

GLU

GLN

ALA

GLN

GLU

LEU

HIS

3

SER

VAL

TYR

MET

SER

GLY

LEU

TRP

LEU

PHE

4

SER

ALA

VAL

ALA

ILE

VAL

ALA

HIS

LEU

ALA

5

VAL

TYR

ILE

TRP

ARG

PRO

TRP

PHE

Samples:

sample_1: Light-harvesting protein b-875, beta chain 2 mM

sample_cond_1: pH: .; temperature: 293 K

Experiments:

Name	Sample	Sample state	Sample conditions
COSY	sample_1	not available	sample_cond_1
NOESY	sample_1	not available	sample_cond_1
TOCSY	sample_1	not available	sample_cond_1

Software:

No software information available

NMR spectrometers:

Bruker DRX 500 MHz

BMRB	4303
PDB	1DX7 1JO5 4JC9 4JCB
EMBL	CAB38752
GB	AAA26166 AAF24302 ABA79431 ABN77006 ABP70923
PRF	1106174A
REF	WP_002720423 YP_353332
SP	P0C0Y1 Q3J1A3
AlphaFold	P0C0Y1 Q3J1A3