BMRB Entry 4553
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4553
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Kriwacki, Richard; Legge, Glen; Hommel, Ulrich; Ramage, Paul; Chung, John; Tennant, Linda; Wright, Peter; Dyson, H.. "Assignment of 1H, 13C and 15N Resonances of the I-domain of Human Leukocyte
Function Associated Antigen-1" J. Biomol. NMR 16, 271-272 (2000).
Assembly members:
Leukocyte Function Associated Antigen-1 Inserted-Domain, polymer, 189 residues, 21268 Da.
MAGNESIUM ION, non-polymer, 24.305 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapien
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET17b
Entity Sequences (FASTA):
Leukocyte Function Associated Antigen-1 Inserted-Domain: MASKGNVDLVFLFDGSMSLQ
PDEFQKILDFMKDVMKKLSN
TSYQFAAVQFSTSYKTEFDF
SDYVKWKDPDALLKHVKHML
LLTNTFGAINYVATEVFREE
LGARPDATKVLIIITDGEAT
DSGNIDAAKDIIRYIIGIGK
HFQTKESQETLHKFASKPAS
EFVKILDTFEKLKDLFTELQ
KKIYVIEGM
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 690 |
| 15N chemical shifts | 191 |
| 1H chemical shifts | 1392 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | LFA-1 | 1 |
| 2 | magnesium | 2 |
Entities:
Entity 1, LFA-1 189 residues - 21268 Da.
| 1 | MET | ALA | SER | LYS | GLY | ASN | VAL | ASP | LEU | VAL | ||||
| 2 | PHE | LEU | PHE | ASP | GLY | SER | MET | SER | LEU | GLN | ||||
| 3 | PRO | ASP | GLU | PHE | GLN | LYS | ILE | LEU | ASP | PHE | ||||
| 4 | MET | LYS | ASP | VAL | MET | LYS | LYS | LEU | SER | ASN | ||||
| 5 | THR | SER | TYR | GLN | PHE | ALA | ALA | VAL | GLN | PHE | ||||
| 6 | SER | THR | SER | TYR | LYS | THR | GLU | PHE | ASP | PHE | ||||
| 7 | SER | ASP | TYR | VAL | LYS | TRP | LYS | ASP | PRO | ASP | ||||
| 8 | ALA | LEU | LEU | LYS | HIS | VAL | LYS | HIS | MET | LEU | ||||
| 9 | LEU | LEU | THR | ASN | THR | PHE | GLY | ALA | ILE | ASN | ||||
| 10 | TYR | VAL | ALA | THR | GLU | VAL | PHE | ARG | GLU | GLU | ||||
| 11 | LEU | GLY | ALA | ARG | PRO | ASP | ALA | THR | LYS | VAL | ||||
| 12 | LEU | ILE | ILE | ILE | THR | ASP | GLY | GLU | ALA | THR | ||||
| 13 | ASP | SER | GLY | ASN | ILE | ASP | ALA | ALA | LYS | ASP | ||||
| 14 | ILE | ILE | ARG | TYR | ILE | ILE | GLY | ILE | GLY | LYS | ||||
| 15 | HIS | PHE | GLN | THR | LYS | GLU | SER | GLN | GLU | THR | ||||
| 16 | LEU | HIS | LYS | PHE | ALA | SER | LYS | PRO | ALA | SER | ||||
| 17 | GLU | PHE | VAL | LYS | ILE | LEU | ASP | THR | PHE | GLU | ||||
| 18 | LYS | LEU | LYS | ASP | LEU | PHE | THR | GLU | LEU | GLN | ||||
| 19 | LYS | LYS | ILE | TYR | VAL | ILE | GLU | GLY | MET |
Entity 2, magnesium - Mg - 24.305 Da.
| 1 | MG |
Samples:
sample_1: Leukocyte Function Associated Antigen-1 Inserted-Domain, [U-13C; U-15N], 1.2 mM; NaH2PO4 10 mM; MgSO4 10 mM; NaCl 150 mM; NaN3 0.05%; 2H2O 5%
sample_2: Leukocyte Function Associated Antigen-1 Inserted-Domain, [U-15N], 1.2 mM
condition_1: ionic strength: 0.28 M; pH*: 7.2; temperature: 295 K
condition_2: ionic strength: 0.018 M; pH*: 7.3 na; temperature: 295 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| HNCA | not available | not available | not available |
| HNCO | not available | not available | not available |
| HN(CA)CO | not available | not available | not available |
| HNCACB | not available | not available | not available |
| CBCA(CO)NH | not available | not available | not available |
| HBHA(CO)NH | not available | not available | not available |
| 1H-15N TOCSY | not available | not available | not available |
| CC(CO)NH TOSCY | not available | not available | not available |
| HCCH COSY | not available | not available | not available |
| HCCH TOCSY | not available | not available | not available |
| HCCH TOCSY (aromatic) | not available | not available | not available |
| 2D 13C HSQC | not available | not available | not available |
| 3D HB(CBCG)CDHD | not available | not available | not available |
Software:
FELIX v97 -
NMR spectrometers:
- Bruker DMX 750 MHz
- Bruker DMX 600 MHz
- Bruker AMX 500 MHz
Related Database Links:
| PDB | |
| DBJ | BAG36913 |
| EMBL | CAA68747 |
| GenBank | AAC31672 AAQ14923 AAZ38713 EAW52244 EAW52245 |
| REF | NP_001029341 NP_002200 |
| SWISS-PROT | P20701 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks