BMRB Entry 4527

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PDB ID: 1dc7
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4527
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C, and 15N Chemical Shift Assignments for the N-terminal receiver domain of NtrC (unphosphorylated)

Deposition date:

1999-11-05

Original release date:

2000-06-16

Authors:

Kern, D.; Volkman, B.; Luginbuhl, P.; Nohaile, M.; Kustu, S.; Wemmer, D.

Citation:

Citation: Kern, Dorothee; Volkman, B.; Luginbuhl, P.; Nohaile, M.; Kustu, S.; Wemmer, D.. "Structure of a Transiently Phosphorylated "Switch" in Bacterial Signal Transduction" Nature 402, 894-898 (1999).

Assembly members:

Assembly members:
Nitrogen regulatory protein C N-terminal receiver domain, polymer, 124 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Salmonella typhimurium Taxonomy ID: 602 Superkingdom: Eubacteria Kingdom: not available Genus/species: Salmonella typhimurium

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Nitrogen regulatory protein C N-terminal receiver domain: MQRGIVWVVDDDSSIRWVLE RALAGAGLTCTTFENGNEVL AALASKTPDVLLSDIRMPGM DGLALLKQIKQRHPMLPVII MTAHSDLDAAVSAYQQGAFD YLPKPFDIDEAVALVERAIS HYQE

Data sets:

assigned_chemical_shifts
- chemical_shift_set_1

Data type	Count
1H chemical shifts	841
13C chemical shifts	391
15N chemical shifts	112

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	NtrCr	1

Entities:

Entity 1, NtrCr 124 residues - Formula weight is not available

1

MET

GLN

ARG

GLY

ILE

VAL

TRP

VAL

ASP

2

ASP

SER

ILE

ARG

TRP

VAL

LEU

GLU

3

ARG

ALA

LEU

ALA

GLY

ALA

GLY

LEU

THR

CYS

4

THR

PHE

GLU

ASN

GLY

ASN

GLU

VAL

LEU

5

ALA

LEU

ALA

SER

LYS

THR

PRO

ASP

VAL

6

LEU

SER

ASP

ILE

ARG

MET

PRO

GLY

MET

7

ASP

GLY

LEU

ALA

LEU

LYS

GLN

ILE

LYS

8

GLN

ARG

HIS

PRO

MET

LEU

PRO

VAL

ILE

9

MET

THR

ALA

HIS

SER

ASP

LEU

ASP

ALA

10

VAL

SER

ALA

TYR

GLN

GLY

ALA

PHE

ASP

11

TYR

LEU

PRO

LYS

PRO

PHE

ASP

ILE

ASP

GLU

12

ALA

VAL

ALA

LEU

VAL

GLU

ARG

ALA

ILE

SER

13

HIS

TYR

GLN

GLU

Samples:

sample_1: Nitrogen regulatory protein C N-terminal receiver domain, [U-15N], 1 mM; sodium phosphate 50 mM

sample_2: Nitrogen regulatory protein C N-terminal receiver domain, [U-15N; U-13C], 1 mM; sodium phosphate 50 mM

sample_cond_1: pH: 6.75; temperature: 298 K; ionic strength: 50 mM; pressure: 1 atm

Experiments:

Name	Sample	Sample state	Sample conditions
3D 15N-SEPARATED_NOESY	not available	not available	not available
3D 13C-SEPARATED_NOESY	not available	not available	not available
2D NOESY	not available	not available	not available

Software:

DYANA v1.5 - STRUCTURE SOLUTION, DATA ANALYSIS

FELIX v95.0 - PROCESSING

XWINNMR v1.5 - COLLECTION

XEASY v1.3.13 - DATA ANALYSIS

NMR spectrometers:

Bruker DMX 750 MHz

BMRB	25124 25125 4528
PDB	1DC7 1DC8 1J56 1KRW 1KRX 1NTR 2MSK 2MSL
DBJ	BAB38213 BAE77441 BAG79675 BAI27885 BAI33008
EMBL	CAA28808 CAA59425 CAD03095 CAP78325 CAQ34219
GB	AAB03002 AAC76865 AAG59057 AAL22844 AAN45373
PIR	AC0950 E86074
REF	NP_312817 NP_418304 NP_458044 NP_462885 NP_709666
SP	P0AFB8 P0AFB9 P41789
AlphaFold	P0AFB8 P0AFB9 P41789