BMRB Entry 4421

Name: 13C,15N and 1H Assigned Chemical Shifts for PhoB DNA-binding Domain.
Published: 2001-05-01

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4421

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

13C,15N and 1H Assigned Chemical Shifts for PhoB DNA-binding Domain.

Deposition date:

1999-09-26

Original release date:

2001-05-01

Authors:

Okamura, Hideyasu; Hanaoka, Shingo; Nagadoi, Aritaka; Makino, Kozo; Nishimura, Yoshihumi

Citation:

Citation: Okamura, Hideyasu; Hanaoka, Shingo; Nagdoi, Aritaka; Makino, Kozo; Nishimura, Yoshihumi. "13C, 15N and 1H Assigned Chemical Shifts for PhoB DNA-binding Domain." The BMRB entry is the only known published source for the data..

Assembly members:

Assembly members:
PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB, polymer, 104 residues, Formula weight is not available

Natural source:

Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Eubacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB: MAVEEVIEMQGLSLDPTSHR VMAGEEPLEMGPTEFKLLHF FMTHPERVYSREQLLNHVWG TNVYVEDRTVDVHIRRLRKA LEPGGHDRMVQTVRGTGYRF STRF

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts

Data type	Count
13C chemical shifts	316
15N chemical shifts	103
1H chemical shifts	733

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	PhoB DNA-binding domain	1

Entities:

Entity 1, PhoB DNA-binding domain 104 residues - Formula weight is not available

1

MET

ALA

VAL

GLU

VAL

ILE

GLU

MET

GLN

2

GLY

LEU

SER

LEU

ASP

PRO

THR

SER

HIS

ARG

3

VAL

MET

ALA

GLY

GLU

PRO

LEU

GLU

MET

4

GLY

PRO

THR

GLU

PHE

LYS

LEU

HIS

PHE

5

PHE

MET

THR

HIS

PRO

GLU

ARG

VAL

TYR

SER

6

ARG

GLU

GLN

LEU

ASN

HIS

VAL

TRP

GLY

7

THR

ASN

VAL

TYR

VAL

GLU

ASP

ARG

THR

VAL

8

ASP

VAL

HIS

ILE

ARG

LEU

ARG

LYS

ALA

9

LEU

GLU

PRO

GLY

HIS

ASP

ARG

MET

VAL

10

GLN

THR

VAL

ARG

GLY

THR

GLY

TYR

ARG

PHE

11

SER

THR

ARG

PHE

Samples:

sample_one: PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB, {U-95% 13C; U-90% 15N], 1.0 – 2.0 mM

sample_conditions: pH: 6.8 na; temperature: 300 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

PDB	1GXP 1GXQ 1QQI 2Z33 3T72
DBJ	BAB33872 BAE76179 BAG75943 BAI23770 BAI29241
EMBL	CAA27659 CAA56927 CAP74933 CAQ30868 CAQ97270
GB	AAA26535 AAB18123 AAC73502 AAG54745 AAL09901
REF	NP_308476 NP_414933 NP_706287 WP_000113916 WP_000113917
SP	P0AFJ5 P0AFJ6 P45606 P45607
AlphaFold	P0AFJ5 P0AFJ6 P45606 P45607